| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1073 |
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| Symbol | |
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| ID | 8529447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 1160271 |
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| End bp | 1162037 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | type VI secretion protein, VC_A0110 family |
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| Protein accession | YP_003258494 |
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| Protein GI | 261820388 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.889843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACTGG AACATTTTTT CAGGGATGAG CTGACTTACT TGCGCCTGCA AGGGCGCGAA
TTCGCCAAGG CGCACCCTGA GCTTACCCGA TTTTTGTCAG AACAAACCAC GGATCCAGAC
GTTGAGCGAC TGCTGGAAGG GTTCGCCTTT TTGACAGGGA GCCTGCGGGC GAAGATCGAG
GATGAATTTC CGGAACTGAC ACACGGTCTG CTGGGCATGC TCTGGCCTAA TTACCTGCGT
CCAGTACCGA GCATGACGAT GATGCAATTT TCGGTGCATC CTGGCGCGAT TGCACAGCCC
GCATTTGTTG AGCGCGGTTG TGAACTCGAT AGCCTGCCGA TTGATGATGT GGTCTGCCAT
TTTCAGACCT GTCACGATAT CTGGATTTAT CCGGCGGATA TCCGCGAGAT TAAGGTACAA
AGCGGTAACG ATCTTTCCAC CATTACGCTG GATATAGGGT TGCATGGCCC GTTATCGCTA
AGCGATCTGC AACTCGACAA GCTGCGCTTT TATCTGGGCG GCGATACCTA TACGGCCTAC
GAACTCTATT TCTGGATCGC CAGCCAACTG TCGCATATTG AGCTGGAAGT CGATGGCCAA
CGCTTCCGTC AAGAGGCCAG CGTGCTGAAG ACGGTCGGCT TCGAGCGAGA AGATGCGCTA
TTACCGTATC CCGGCAATGT CTATTCGGGC TACCGCATCC TGCAGGAATA CTTTTGCTTT
CCTGAAAGTT TTCTCTTTTT CCAACTTGCT GGCGCGGTAT GGCCGGATCT TCCGCTGACG
GTAACGGAGT TCCGTCTGCA TTTTTGTTTT GATCGTCCGT TGCCAGCGGA GCTGAAGATC
CGTCCTGATT CATTCATGCT CAACTGCGTG CCTGCAATCA ATCTCTTCCG ACACGATAGC
GAGCCGATCA ACCTTAGCGG ACGCCAGACG GATTACCCGC TGAAGGCCAG TTACCGTAAC
GCCGATAGCT TTGAAATCTT CTCTGTGGAT AAGGTTGAGG GGTGGGTTGA AGGCAATTCA
GGTCGTGCTC GGGGTATCCC ACGCACGTAT CAGCCCTTTG AGAGCTTTCA GCACCAAATC
GAGCGAGCTA AAGGGCGATT GGCGCTCTAT TACCGTATTC GGATAAGAGA AGCGGTGAAC
GGCAATGGTT TTGAACACAT GCTCTCTTTT GTGCGGGGCG ATGAGCGGGA AGTCATTGAT
TTGGATGAAT CCATCTCGGT GACTCTGACC TGTACCAATC GGTCGCGTGC GGCACAACTG
CCCGTTGGGG CGATTTGTGT ACCAGCCGGT AACTCACCGT CTTTCGCGAC GTTTCGTAAT
TTGTTACGGC CAACGCGGCC ACTGCGGCCT GCGATGGATG GCAGCCTGCA TTGGACGCTG
ATCTCCAACC TGTCGCTGAA CTATGTGTCG CTGCTGCGGC GTGATGCGTT GGTACAGATC
CTACGTACCT ACGATTTCCC AGCGCTGCAC GACAAGCAGG CGGAACAAGC CTCGCGTAAG
CGTCTGGCGG GTATCGAGTC TATCGAAACC ACGCCTATCG ATCGCCTGGT TCAGGGGATG
CCGGTTCGTG GCTTGAAATC AATCCTGTCT GTACGGCAAT CCGCGTTTTC CAGTGAAGGA
GAACTGTACC TGTTTAGCAC GGTGCTGGCG CACTTTTTCT CGCTATACGC CAGCGTCAAC
GCTTTCCACC TGTTGGAAGT GGTCAACATC GATAACAAGG AGCGCTACCG ATGGCCGGTA
CAGATAGGTC AACACTCAAT GATGTAA
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| Protein sequence | MSLEHFFRDE LTYLRLQGRE FAKAHPELTR FLSEQTTDPD VERLLEGFAF LTGSLRAKIE
DEFPELTHGL LGMLWPNYLR PVPSMTMMQF SVHPGAIAQP AFVERGCELD SLPIDDVVCH
FQTCHDIWIY PADIREIKVQ SGNDLSTITL DIGLHGPLSL SDLQLDKLRF YLGGDTYTAY
ELYFWIASQL SHIELEVDGQ RFRQEASVLK TVGFEREDAL LPYPGNVYSG YRILQEYFCF
PESFLFFQLA GAVWPDLPLT VTEFRLHFCF DRPLPAELKI RPDSFMLNCV PAINLFRHDS
EPINLSGRQT DYPLKASYRN ADSFEIFSVD KVEGWVEGNS GRARGIPRTY QPFESFQHQI
ERAKGRLALY YRIRIREAVN GNGFEHMLSF VRGDEREVID LDESISVTLT CTNRSRAAQL
PVGAICVPAG NSPSFATFRN LLRPTRPLRP AMDGSLHWTL ISNLSLNYVS LLRRDALVQI
LRTYDFPALH DKQAEQASRK RLAGIESIET TPIDRLVQGM PVRGLKSILS VRQSAFSSEG
ELYLFSTVLA HFFSLYASVN AFHLLEVVNI DNKERYRWPV QIGQHSMM
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