| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1070 |
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| Symbol | |
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| ID | 8529444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 1157817 |
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| End bp | 1158320 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | type VI secretion protein, VC_A0107 family |
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| Protein accession | YP_003258491 |
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| Protein GI | 261820385 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.533436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAG GAACTGATGG TGCATCTGTC GCACCAAAGG AACGTATTAA TATCAAATAT
GTTCCGGCCA CTGGTGGTCA GCAGGCGGAA ATAGAATTGC CGTTGACGCT GATGATCGTG
GGAAATATGA AAGGGCGCAC AGAGGAAACG CCGATCGAAG AACGTCAGAC CGTATCGATC
GATAAGAACA ATTTTACCTC CGTGATGAAA GAAGCCAATC TGGAACTGAA TTTCAGTGTG
CCAAATCGCC TTGAAGAAGA GAGCCAAGAC GACCTGCCAG TGAAACTGAG TATTGCTGGC
TTGAATGATT TTTCTCCTGA CCGCATCGCC CAACAAGTGC CTGAATTACG TAAGTTGCTT
GATTTACGTG AAGCATTGGT CGCGCTGAAA GGCCCCCTCG GCAATATTCC CTCATTCCGT
AATCGTTTGC AGGATCTGTT GTCCAGCGAA GAAGCCAGAG AGCAGCTTTT GAAAGAGCTC
GATCTGGTGA AACCCGCCGA ATAA
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| Protein sequence | MAKGTDGASV APKERINIKY VPATGGQQAE IELPLTLMIV GNMKGRTEET PIEERQTVSI
DKNNFTSVMK EANLELNFSV PNRLEEESQD DLPVKLSIAG LNDFSPDRIA QQVPELRKLL
DLREALVALK GPLGNIPSFR NRLQDLLSSE EAREQLLKEL DLVKPAE
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