Gene Pecwa_1049 details

Gene Information

• Locus tag: Pecwa_1049
• ID: 8529423
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 1137435
• End bp: 1138148
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 53%
• Product: polar amino acid ABC transporter, inner membrane subunit
• Protein accession: YP_003258473
• Protein GI: 261820367

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGATCA TAGACGCAAT TTTTCCAGCA GGCAGCGCTT TCGCAGTATT GCTCCCCTGG 
CTACCGCTGA TCCTGAAAGG GTTTGGGCTC AACTTGCTCA TCTCGGTTCT GAGTATGGCG 
ATTGGCATGT TGGCCGGTAC ACTGCTGGGT GCGGCACAAA TGGCTAACCT TGCGATTATC 
CGACTGCCTG CTCGCATTCT GACATTATTC TTTCGCAACA GTCCCTGGCT GGTCATCATG 
TTTTATGTGA TGTTCCTGCT GCCGTTTGAG ATCAAGATTG CAGGCACCTG GTTCAGTTTT 
CCAGACTGGG TAAAAGCCGT TGTGGCGCTG GCTATCCCCG TCAGTGGTTA TACCTCGGAG 
ATTGTGCGCG GCGGGCTGAA ATCCATACCC ACCACCCAGT GGGAAGCGGC CGCTGCCCTC 
GCCTTCGGCA CCGTTCGCAC CACGCTCACG ATCATTTTAC CGCAGGCGAT ACGCCAAATG 
GTGCCTCCCA CCATGAACCT GTATTGCTCA GTGGTTATGG CAACGTCGCT GGCTAATGTG 
GTTGGCGTAC AGGAAGTCAT GACGATCACC CAAACGATTC TGACCACGGA AACACGCCCC 
GGCCTGATTC TGCCAGCCTA TAGCATTACG CTGATCCTCT TTTTTGCTTT TGTTTTTCCG 
ATCTCGTTAT TTTCACGCCG TTTAGAACGG ACGTGGCAAT TTGGAACCCG CTGA 

 

Protein sequence

MTIIDAIFPA GSAFAVLLPW LPLILKGFGL NLLISVLSMA IGMLAGTLLG AAQMANLAII 
RLPARILTLF FRNSPWLVIM FYVMFLLPFE IKIAGTWFSF PDWVKAVVAL AIPVSGYTSE 
IVRGGLKSIP TTQWEAAAAL AFGTVRTTLT IILPQAIRQM VPPTMNLYCS VVMATSLANV 
VGVQEVMTIT QTILTTETRP GLILPAYSIT LILFFAFVFP ISLFSRRLER TWQFGTR