| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1043 |
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| Symbol | |
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| ID | 8529417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 1130088 |
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| End bp | 1131956 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | putative avirulence protein |
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| Protein accession | YP_003258467 |
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| Protein GI | 261820361 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAGA TGAAAACACT TCTCACGCCG CTAAACTGTT TACTCGTTTT AAGCGGCGCA
TTAATGGTCA ATACGGCAAA TGCTGCTGAA GCTTGCGTCG CAGGTAACTG GCAGGTAAAT
AGTTCCATCA CCGATATGCC TTCCGTGAAA TACCAGACGG AGCACTTTGC CTTCCGCTGG
AATAATAACG ACGTTAACCG TAATGACGCG GTTGCCGCCG GGCAGAAACT GGAACAAATT
TGGGATAAGT TCATTAACCA AATTCAGTAC CCAGAGCCTT ATTGCAAGCA AACCGTAAAA
TATAAAGCCA ATATTCACAT CGATCCTACT TTTGGCCTCA GCGGCGGTAT TGCTGGTGGT
GGCAGTATGG GAATGTGGAT CGGCCCCGCC TCACTGAAGG ATAACTGGGG GCTGGCGCAT
GAATTTACCC ATGCGTTACA GGGCCAAACT GGCGGTTTTC AGGGTTCGGG CGGGGCAGAC
TACGTTGGCT GGATTTGGGA ATCCCATGCG AACTGGATGA CGCACCAGAT GGATGAATTC
CGCGGTACGT CAGCACACTG TTCGGAAATG CAGGTCAACT ATTCGCATAT TTATCTGGGT
TCAACCCGTA ACCGTTACTG CAACTGGCAG TTTATGGAAT ACCTGAAAAA CCGCTTTGGC
TATGGCGTTA TCAACGATAT GTGGTCAAAG GCGCCGAAAG GGGGCGAAAG CGGTCAGGCT
ACTGCCGATC CATTGTCCGT TCTGCGTACC AACATGGCGT GGAGTCAGTC TGAATTCAAC
GATATCTTCG GCGACTGGGC AATGCACAAC GTCAACTGGG ATTACGTCGA TCCAGATGGT
TTCGACCGTG GTCGGTTTTA TCGTTCAACC TACGGCAGCT ATGGTGCGGT ACAACCTAAC
CAGAGTAACG CCGACCGCCT GTTAAGAACG ACAGCGCTTG AGCCCGTTGT CGGAGCCAGC
GCCAGCCTCC GACGCTTCTC TGTACCGTTC GATCAGGCTC CACAGCAGTT GGGCTACAAC
ATCGTCCGGT TAATCCCTGA AAGTGGTGCG ACGAAAATCA CCGTCAAATT CCGTGGCATG
GTGCAGAGTA AATCTGCCAT TACCCGCTTC CCTGGGCTGA AAAACGATCC GGCAACCATG
CCGCAGCCAA ATTCCGACTG GCGTTGGGGT ATTGTTGCGA TTGGCTCAGA CGGCGTTTCA
CGTTACAGCG AATTGCAGCG TGGCGCATCG GCAACGCTGA AAAACTTCAC TATCCGACAG
GACGATCGCG GCATTTACAT GGTCGTGATG GGCACGCCGT CGCAAATGCA GAAGATCAAG
TGGGATCAGG CTTACTACTC CCTTTACCGC TATCCGTGGA TGGCTGATTT CACTGGCGTT
TGGCCAGAAG GCAGCCAACC CGGTGCACCG AATCCAACCG CTAACGGCTC TCGCCATCCA
AACGGCGGCG GCTGGGTATC TAACTCCGCA AATGTCGCCC CTACCGCATA CGTCGGGCCT
TATGCTCGCG TGATCGGCGG TACGGTGAGG GATAACGCCA GAATTGAAGA TCGTGCAACG
ATTCTGAGCG GAACGGTGGA AGGACGTGCC GTTGTTAGCG GCCTGACCGT GATGCAGGGC
GATACCATCG TCCGTGATAA CGCACGGCTG CATACGGTCT TCATGGGGCC GGGAGCCTAT
GAACGCGGTA TTGTGTTGTC AGGCAATGCG CAAATGCGCG GGGATGCGGA AATTCGCGGT
GTTTCCGCAT CGCAGGGCGT ATTCTATGGC TTTATTGATG AAGATGAAGT CAAAAGCAGC
GCAGCCGGTG CTTACCTGAC CGAGGCCGTG CCAGAAGTGA CGGCGGTTCC GGTCTACAGC
ACAAAATAG
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| Protein sequence | MPKMKTLLTP LNCLLVLSGA LMVNTANAAE ACVAGNWQVN SSITDMPSVK YQTEHFAFRW
NNNDVNRNDA VAAGQKLEQI WDKFINQIQY PEPYCKQTVK YKANIHIDPT FGLSGGIAGG
GSMGMWIGPA SLKDNWGLAH EFTHALQGQT GGFQGSGGAD YVGWIWESHA NWMTHQMDEF
RGTSAHCSEM QVNYSHIYLG STRNRYCNWQ FMEYLKNRFG YGVINDMWSK APKGGESGQA
TADPLSVLRT NMAWSQSEFN DIFGDWAMHN VNWDYVDPDG FDRGRFYRST YGSYGAVQPN
QSNADRLLRT TALEPVVGAS ASLRRFSVPF DQAPQQLGYN IVRLIPESGA TKITVKFRGM
VQSKSAITRF PGLKNDPATM PQPNSDWRWG IVAIGSDGVS RYSELQRGAS ATLKNFTIRQ
DDRGIYMVVM GTPSQMQKIK WDQAYYSLYR YPWMADFTGV WPEGSQPGAP NPTANGSRHP
NGGGWVSNSA NVAPTAYVGP YARVIGGTVR DNARIEDRAT ILSGTVEGRA VVSGLTVMQG
DTIVRDNARL HTVFMGPGAY ERGIVLSGNA QMRGDAEIRG VSASQGVFYG FIDEDEVKSS
AAGAYLTEAV PEVTAVPVYS TK
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