Gene Pecwa_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_1040 
Symbol 
ID8529414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand+ 
Start bp1126045 
End bp1126731 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content52% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003258464 
Protein GI261820358 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACGT CTTTTCAAAT CAACAACAAC GAACCAGTAA ACCAGCAAAT ATATCGCGTA 
CTGCGTAAAG ACATTGTGGA ATGCAATATT CCGCCGGGTA AGTTACTGTC TGAAAAAGAG 
ATATCTGTGC GCTTCGATGT TTCCCGCCAG CCGGTCAGAG AGGCCTTTAT CAAGCTGGCC 
GAAGCTGGAT TGGTGCAGAT CATGCCGCAG CGCGGCACGT TTGTGATGAA GATCTCCGAG 
CAGCGCGTAG CGGATGCTCG CTTTATCCGT CAGGCGCTGG AATGTGCCAT TGTGCGTCGG 
GCAGCCGAAA TGGTGACGGA TGAACAACTA CTAACGCTAG AGCACAACTT ACGCCGTCAG 
GAACTAGCCG CGCAAAATGA GCAGGTGCGC GAGTTCCTTA GCCTCGATGA CAGCTTCCAT 
CAGCTTCTGA CGCAGATTGC CAACTGTCCG CTGGCGTGGG AAACGATCGA ATCGATCAAA 
GCGACGATGG ACCGCGTGCG TTTTCTCAGC CTGAGTCAGG TATCTCCCCC GCCAAGCCTG 
ATCCAACAGC ACTACCTGAT TTTTAGCGCC CTGAAAGCGC GCGATCCCGA TGCGGCAGAA 
AAAGCGATCC GTGAGCATTT ACAGGAAATG ATCTATTCGA TCACGCCGAT TGCGAAGCAG 
AATAGTGACT GGTTTGAGCA CGTCTGA
 
Protein sequence
MDTSFQINNN EPVNQQIYRV LRKDIVECNI PPGKLLSEKE ISVRFDVSRQ PVREAFIKLA 
EAGLVQIMPQ RGTFVMKISE QRVADARFIR QALECAIVRR AAEMVTDEQL LTLEHNLRRQ 
ELAAQNEQVR EFLSLDDSFH QLLTQIANCP LAWETIESIK ATMDRVRFLS LSQVSPPPSL 
IQQHYLIFSA LKARDPDAAE KAIREHLQEM IYSITPIAKQ NSDWFEHV