| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1038 |
|---|
| Symbol | |
|---|
| ID | 8529412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 1123012 |
|---|
| End bp | 1124385 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003258462 |
|---|
| Protein GI | 261820356 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAGC ATAAGATAGC ATCTGGACAA GGTAAACCTG CAAGAAGTAC CTCTGACTTA
GTTAAAGCGG CGGTGTCCGG TTGGCTGGGC ACCGCATTGG AATTCATGGA TTTCCAACTG
TATTCGCTCG GAGCGGCATT AGTCTTCCAT GAAATATTCT TCCCTGAGCA ATCGGCGGCA
ATGGCGTTGA TTCTGGCAAT GGGCACCTAT GGTGCAGGCT ATATTGCGCG TATTGTCGGT
GCCTTTATTT TTGGCCGTAT GGGTGATTCC ATCGGTAGAA AGAAAGTGCT CTTTATTACC
ATCACCATGA TGGGGATCTG TACTACCTTA ATCGGCGTCC TACCGACCTA TGCACAGATT
GGTATTTTCG CGCCGATCTT GCTGGTGACC TTGCGTATTG TGCAGGGACT GGGGGCGGGC
GCAGAAATTT CCGGTGCAGG CACCATGCTG GCTGAATACG CGCCAAAAGG GAAACGCGGG
ATTATTTCCT CACTGGTTGC GATGGGAACT AACTGCGGCA CGCTTAGCGC CACGGCTATC
TGGGCCGTTA TGTTTTTCAC CCTTGAAAGA GAAGAGTTAC TGGCGTGGGG CTGGCGTGTC
CCGTTCCTGG CCAGCGTAGT CGTGATGATA TTTGCGATCT GGCTGCGTAT GAACCTGAAA
GAAAGCCCGG TCTTTGAGAA AGTCAGTAAT GATGTTTCCG GGACTGAAGA ACCGTCCTCT
GCTCTGGTCG TTGAACAAAG CGAGCAAAAA TCCGTATTGT CGATGTTCAA AGGCAAAGCG
TTTTGGCTGG CCGTCGGGTT GCGTTTCGGT CAGGCAGGGA ATTCAGGATT AATCCAGACC
TTCCTTGCTG GATATTTGGT TCAAACGCTG TTGTTCGAGA AGTATATTCC GACAGATGCG
CTGATGATCA GTTCTATTAT CGGTTTCATC ACTATTCCAT TCTTAGGATG GCTCTCAGAT
AAGATCGGCC GTCGCGTGCC TTATATTATT CTGAATATTT CGGCGATATT GTTAGCCTAC
CCAATGCTCT CTCTTATCGT TGATAAAGAG AATAGCGTGA ATGTCATTAT CGTCAGCATT
ATCATTATTC ATAACTTCGC GGTGCTGGGA CTCTTTGCGC TGGAAAATAT CACCCTGGCG
GAAATGTTCG GCGGACGTAG CCGGTTTACG CAAATGGCGA TTGCTAAAGA AACCGGTGGT
TTGGTTGCCG TTGGTTTTGG TCCGGTATTA GCCGGTATTT TCTGCAACAT GACTGGTTCC
TGGTGGCCGA TTGTCGTGAT GTTGATTGTC TATTCACTGA TTGGTCTATT CGCGGCTATC
AGCATGCCGG AAGTCAAAGA TCGCGATTTA GATGAATTAG ACGACGCTGC ATAA
|
|---|
| Protein sequence | MNKHKIASGQ GKPARSTSDL VKAAVSGWLG TALEFMDFQL YSLGAALVFH EIFFPEQSAA
MALILAMGTY GAGYIARIVG AFIFGRMGDS IGRKKVLFIT ITMMGICTTL IGVLPTYAQI
GIFAPILLVT LRIVQGLGAG AEISGAGTML AEYAPKGKRG IISSLVAMGT NCGTLSATAI
WAVMFFTLER EELLAWGWRV PFLASVVVMI FAIWLRMNLK ESPVFEKVSN DVSGTEEPSS
ALVVEQSEQK SVLSMFKGKA FWLAVGLRFG QAGNSGLIQT FLAGYLVQTL LFEKYIPTDA
LMISSIIGFI TIPFLGWLSD KIGRRVPYII LNISAILLAY PMLSLIVDKE NSVNVIIVSI
IIIHNFAVLG LFALENITLA EMFGGRSRFT QMAIAKETGG LVAVGFGPVL AGIFCNMTGS
WWPIVVMLIV YSLIGLFAAI SMPEVKDRDL DELDDAA
|
|---|
| |