| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1034 |
|---|
| Symbol | |
|---|
| ID | 8529408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 1118098 |
|---|
| End bp | 1119063 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | Alpha/beta hydrolase fold-3 domain protein |
|---|
| Protein accession | YP_003258458 |
|---|
| Protein GI | 261820352 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTATT CGAAAGCAAC AAAAATAGGA TTGGCAACCT TGGCAATGAT GAGCGCGACA
GCAATCAATG CGGCACAGAA TCAACATGAC ATCACCGTAA AGCAGGAAAT CACATCGGTG
AAGTTAATCT CTGACGTCGT TTATTCTCAG GTATCAATGC GGGGCTATCC AAATGTTGCA
TTAAAAATGG ATATTCTTCA GCCTGAAGCG AAGACAGCAC TTCCCGTTGT GTTATTCATT
ACCGGCGGCG GCTTTATTAA CGCCAATAAA GATAATTATC TGCAACAGCG CCTGAGCATT
GCTGAAGCGG GCTATGTGGT TGCCAGTATG GAATACCGTG TCGCCCCTAC CGTACTTTTC
CCCTCGCCGC TGGAAGATGT AAAATCCGCC ATTCGTTATC TGCGGGCAAA CGCGAAAAAA
TTCGGTATTG ACGGACAACA TGCTGCGGTT TTCGGCGCAT CTGCGGGAGG ATATCTGGCG
GCATTTGCTG GAGCGACCAA TAGCTCAAAA ACCTACGATA AAGGCGATTA TCTTGACCAA
AGCAGTGATG TCCAGGCCGT GATCGATTTC TATGGATTAT CCGATCTGAC GCTCGTTGGT
GAAGGCTTCC CGGACGATGT CGTGCAGAAA CACGCGTCAT CTTCTGCGAC TGAAGCTATC
TGGGTTAACG GCACTGCGGT GTTTAATGAA GGAGGGGCAA TCACTCGTTA TCCAGACAAA
GCGGCGGCCG CAAACCCGAT TAATTTTATC AGCAGCGCGA CACCTCCATT TCTGATCATG
CACGGCACGA ACGATACCTC GGTTTCTCCA CGCCAGACCG AACGACTGCA TCAGGCTCTG
ATAGCGAAAA ATATCGAATC GACCTATTAC AGCGTTAACG GCGCAGAGCA CGGTGGGCCA
CACTGGCTAC AACCGGCAAT CATGCAAATT ACCGTCCGCT TTCTTGATAA ACACCTAAAA
CCCTGA
|
|---|
| Protein sequence | MDYSKATKIG LATLAMMSAT AINAAQNQHD ITVKQEITSV KLISDVVYSQ VSMRGYPNVA
LKMDILQPEA KTALPVVLFI TGGGFINANK DNYLQQRLSI AEAGYVVASM EYRVAPTVLF
PSPLEDVKSA IRYLRANAKK FGIDGQHAAV FGASAGGYLA AFAGATNSSK TYDKGDYLDQ
SSDVQAVIDF YGLSDLTLVG EGFPDDVVQK HASSSATEAI WVNGTAVFNE GGAITRYPDK
AAAANPINFI SSATPPFLIM HGTNDTSVSP RQTERLHQAL IAKNIESTYY SVNGAEHGGP
HWLQPAIMQI TVRFLDKHLK P
|
|---|
| |