| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1032 |
|---|
| Symbol | |
|---|
| ID | 8529406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 1115934 |
|---|
| End bp | 1116896 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | cytochrome c nitrite reductase, NrfD subunit |
|---|
| Protein accession | YP_003258456 |
|---|
| Protein GI | 261820350 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATAATG CCTTCACGTT TGACACGCTG GTATGGGATT GGCCCATCGC CGTTTATCTT
CTTCTGGTCG GCATTTCAGC GGGGATGGTG TCGCTGTCCC TGCTGCTCAG GCACTACGTC
CCCATCGAAT ATAACGGCAG TAATCGCATG ATCAAAGCCA CCGCCATCGT GGCACCGCTT
GCCGTGATCT TCGGGCTGGT GATCCTGATT TTTCATCTGA CTAAACCGCT GACCTTTTGG
TATTTGATGG TCTTTTACAA TCCCACCTCC ATCATGTCGC TTGGGGTGAT GCTCTTTCAG
GTGTATTTCA TCGTGATGCT GTTATGGCTC ATCACGCTTT ATCATGACGT ATGGCTGACT
CAGCTTGAGA CCGTCTGGCA CCGCCCCGCG CTGGCTGTGC AAGCACGTAA GCTGGCGGCG
ATTATCGTTA AAAATGCCGC GGTGATTGAA AATCTGCTGC TGGTACTGGC AGTCCTGCTC
GGTTGCTATA CCGGCTTTCT GCTGTCCGCG CTGAAATCAT TCCCGTTACT GAACAATCCC
GTCCTGCCCG TCCTGTTTCT GGTATCCGGC ACCACCTCCG GTATTGCCGT CATGCTGCTG
GCCAGCGCAT GGGGGCGTCA TACCTCAGGG AATTCACTCT CCCTGCATTT CATCCATCGT
GTAGAAACTC CGGTGGTGTA TGCCGAACTG TTCCTGCTGC TGGCGTTTTT TGTCGGGCTG
CTGCTTGGCG GTGGGCAAAA AGTTATCGCC GCTCAGACCG CACTGTCAGG ATTCTGGGGC
AACGTATTTT GGATTGGCAT TATCGGCATC GGCATTGTGA TCCCTTCTAT TGTCAATCGG
GTACGCAAAC CATCTGCTCA TTCTGGCAAA GGGCAAGTGA TTATCTTAGC CGTCATGAGC
CTATTCGGCG TGTTCCTGCT ACGACTGTTC GTGCTTTATG CCGGACAAAT GACGGTGGCT
TAA
|
|---|
| Protein sequence | MHNAFTFDTL VWDWPIAVYL LLVGISAGMV SLSLLLRHYV PIEYNGSNRM IKATAIVAPL
AVIFGLVILI FHLTKPLTFW YLMVFYNPTS IMSLGVMLFQ VYFIVMLLWL ITLYHDVWLT
QLETVWHRPA LAVQARKLAA IIVKNAAVIE NLLLVLAVLL GCYTGFLLSA LKSFPLLNNP
VLPVLFLVSG TTSGIAVMLL ASAWGRHTSG NSLSLHFIHR VETPVVYAEL FLLLAFFVGL
LLGGGQKVIA AQTALSGFWG NVFWIGIIGI GIVIPSIVNR VRKPSAHSGK GQVIILAVMS
LFGVFLLRLF VLYAGQMTVA
|
|---|
| |