Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1025 |
Symbol | |
ID | 8529399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 1109359 |
End bp | 1109829 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | transmembrane pair domain protein |
Protein accession | YP_003258449 |
Protein GI | 261820343 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAATA AAACCAGCAA AACCATACGT GAACGTTTGT ACCATGCGGT GGGCTTTGAG CTGATTGCGT TGATGATCTG TGCGCCAGCG GGTGCCTGGC TGCTCAATAA GCCGCTCTTC GATATGGGGG CACTAGCCAT TATGCTGTCC AGTGTCGCGA TGATCTGGAA TATGATCTAC AACTCGATAT TCGATCGCTT ATGGCCTGCG GATCGCGTTA AACGTCGGTT GCCGATCCGC GTCGCACATG CGCTGGGGTT TGAAGGCGGC TTTATCCTGA TTGGTCTGCC GCTGGCGGCG TGGATGCTGA ACATCACGCT GTGGCAGGCG TTGATGGTGG AGATCGGCTT CTTCCTGTTC TTCCTGCCTT ACACAGTGGC GTATAACTGG GCCTACGATA CATTGCGGGA ACGCATTATG AACCGCCGTC GCGACGTTCG TCAGGTGTCG GCGAACTCCC GTCTGCGTTA A
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Protein sequence | MQNKTSKTIR ERLYHAVGFE LIALMICAPA GAWLLNKPLF DMGALAIMLS SVAMIWNMIY NSIFDRLWPA DRVKRRLPIR VAHALGFEGG FILIGLPLAA WMLNITLWQA LMVEIGFFLF FLPYTVAYNW AYDTLRERIM NRRRDVRQVS ANSRLR
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