Gene Pecwa_1008 details

Gene Information

• Locus tag: Pecwa_1008
• ID: 8529382
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 1089113
• End bp: 1089793
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 53%
• Product: two component transcriptional regulator, winged helix family
• Protein accession: YP_003258432
• Protein GI: 261820326

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATATTT TACTGGTCGA TGATGACGTA GAACTGGGTG ATATGCTCTG TGAATATCTG 
AATGCGGAAG GATTTTTGAC TTCCCGGGTG CTGACGGGCA AAGAGGGCAT CGATGGCGCA 
ATGTCGGGGG ATTACACCGC GATGATTCTG GATGTCATGC TACCGGATAT GAGTGGGATT 
GATGTACTAC GCCAGATCAG AAAAACCGAG CAGTTACCGG TTATTATGCT GACGGCGAGA 
GGGGATAATA TTGACAGGGT CATCGGTCTG GAAATGGGGG CGGATGACTA TATGCCCAAG 
CCGTGCTACC CGCGTGAACT GGTAGCGCGA CTGAGGGCGG TGCTACGACG TTATGACGAG 
CAGCCGAGTA CGAAACGGGA CGCAAGCGTA GCGGCCAGTG GTGAACTGGT ATTGCACCCT 
GCGACGCGCA TCAGCGCATG GCGCGGGAAG CCGTTTGATC TGACGGCATC TGAGTTTAAT 
TTGCTGGAAC TGCTATTGCG TTTTCCTGAG CGGGTGGTGT CAAAAGATGA ACTGTCCGAA 
AAATGTCTGG GGCGTCGCCG TGAGGCTTAT GACCGCAGCG TAGACGTACA TATCAGCAAT 
ATTCGTCAGA AGCTTGGGGC ATTACCGGGC AACACGATGA CGATTGAAAC CGTGCGCAGC 
GTCGGATACC GGATTCGCTG A 

 

Protein sequence

MNILLVDDDV ELGDMLCEYL NAEGFLTSRV LTGKEGIDGA MSGDYTAMIL DVMLPDMSGI 
DVLRQIRKTE QLPVIMLTAR GDNIDRVIGL EMGADDYMPK PCYPRELVAR LRAVLRRYDE 
QPSTKRDASV AASGELVLHP ATRISAWRGK PFDLTASEFN LLELLLRFPE RVVSKDELSE 
KCLGRRREAY DRSVDVHISN IRQKLGALPG NTMTIETVRS VGYRIR