Gene Pecwa_0942 details

Gene Information

• Locus tag: Pecwa_0942
• ID: 8529315
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 1014524
• End bp: 1015108
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 40%
• Product: filamentation induced by cAMP protein Fic
• Protein accession: YP_003258367
• Protein GI: 261820261

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.052595
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTGATA AATATGGCTC AAGGCAAGAT CCTTATACCT ATCCTGATAG CGATATCCTG 
ATAAATAAAC TCGGCATCAA CGATGACAGT AAATTTGACG ATGCGGAACG TCAACTATCC 
GAACTGGCCG TTCTCGATAT TGAATTTGAA GAGCCGCCTT ACGATCTGCA TTATTGGTGT 
GGTCTGCACG GGAAAATATT CGGGGATTTA TTCGATTGGG CAGGAGAAAT ACGGTGTATC 
GATATTTCTA AAGGTCAAAC ACGTTTTTGT ACCGCATTCC GTATCGAAAT TGAAGCCAAT 
AAAATTTTTA CGCAGCTATC CAATGATGCT TTTTTACAAG GCTTTGAGCG TCCAGTGCTA 
ATAATTCAGT TAGCAGAATA TTATTCAGAT TTGAATGTAA TTCATCCGTT TCGGGAAGGC 
AATGGACGTT CTCAGCGTTT ATTGTTCGAG CATATGATTA TTAATTGTGG CTATGGTGTT 
TCTTTCGAAA AGATTGGCAT TCAGGAATGG TTAGCGGCTA ATGTAGCCGG ATACCATGGC 
AATACTCGAC CATTAGCCGA TATTTTTGAT AAAAGTATTC TCTGA 

 

Protein sequence

MPDKYGSRQD PYTYPDSDIL INKLGINDDS KFDDAERQLS ELAVLDIEFE EPPYDLHYWC 
GLHGKIFGDL FDWAGEIRCI DISKGQTRFC TAFRIEIEAN KIFTQLSNDA FLQGFERPVL 
IIQLAEYYSD LNVIHPFREG NGRSQRLLFE HMIINCGYGV SFEKIGIQEW LAANVAGYHG 
NTRPLADIFD KSIL