| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0900 |
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| Symbol | |
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| ID | 8529273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 955862 |
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| End bp | 956821 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | |
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| Product | Type II secretion system F domain protein |
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| Protein accession | YP_003258325 |
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| Protein GI | 261820219 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTATTT TTGACGATCC CTTACTGCTG CTGGCGCTCG TGCTGATGGT GGCTGGCATT
TATCTGGCCC GTGCGCACCA TAAAACGCAG CAATACAAGC AGTTGGAAAT TCGCATGCGC
GGGCACTTGC CCACGGCCTC TATAGAGGCG GCCTCTCAGG AAAACATCCT GAGAGGCCAG
GGAACTGCAT TATCCCCCCT GTTGGAAAAG CTGTTGCAGC CCCTTGCTAT ACAGGGCGAG
CGCCTGTCGG GATCGGATCG CGATCGTCGC AATCTGCGTC GCCTGCTGGA TCTGGCTGGT
CTCCGCCGTA ACGAAGCGGT GGGCTGGCTG GTGATGGGGA AATTTGCCGC TGGGGCGCTG
CTTGCTATCG CTTTGGTGTG GGGATGGCTA CCGCCTGCTG ACCGTGCTGG CCTGACGGGG
GTCGCGGCGG GGCTCATTGG CTTCTTTGTT GGCTCGATGG TGCCGGAGTG GTGGCTAAAG
TGGCGTGCGG CAAGCCGAGG CGAAAAGCTG GCGCGTGCGG TGCCGGATGC ACTGGACCTG
ATGGTGGTCT GTGCCGAAGC CGGTTTGCCT ATCGGGCGTG TATTGCAGGT GGTGTCAAAG
GAGTTGGGAC TATCGTCGCC GGAAATGGCG GATGAACTGC ACTACACCGC GGCCGAATTA
CAGATCCTGT CGGATCGTAC ACTGGCGATG AGGCATCTGG CGGAGCGTAC CCGGGTTAGT
GAGATCGAAA GTATGGTCGC GACGCTGATC CAGGCGGAAC GCTACGGTAC GCCGTTGTCT
CAGGCGCTGC GTACCATTGC GGATGAAAGC CGCAAGACGC TGATTTTAGG GCTGGAAGAG
AAGGCGGGGA AATTACCTGC GCAACTGAGC GTGCCGTTGA TGGCGCTGAT CCTGCCACCG
ATTATTGCCA TTATGGCGTC GCCTGCATTG GTACGAGTGA TTCGCCTGTT GGCGCAATAA
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| Protein sequence | MTIFDDPLLL LALVLMVAGI YLARAHHKTQ QYKQLEIRMR GHLPTASIEA ASQENILRGQ
GTALSPLLEK LLQPLAIQGE RLSGSDRDRR NLRRLLDLAG LRRNEAVGWL VMGKFAAGAL
LAIALVWGWL PPADRAGLTG VAAGLIGFFV GSMVPEWWLK WRAASRGEKL ARAVPDALDL
MVVCAEAGLP IGRVLQVVSK ELGLSSPEMA DELHYTAAEL QILSDRTLAM RHLAERTRVS
EIESMVATLI QAERYGTPLS QALRTIADES RKTLILGLEE KAGKLPAQLS VPLMALILPP
IIAIMASPAL VRVIRLLAQ
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