| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0897 |
|---|
| Symbol | |
|---|
| ID | 8529270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 952164 |
|---|
| End bp | 953363 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_003258322 |
|---|
| Protein GI | 261820216 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAA TTACCCCTAA CGATAGTGAC GAACTGGCGC TGCCGCTGGT CGCGTTCGCC
AATGATGTGC GCGATGTGGC TGATATCAGC GATCTCTTCA CGCGTCTGAA ACAACCGGAT
GTCCCGGTGA TGCCCGGTGG TATTACTGCC GCTCGCCAGT GGTGTGAACT GAATGTACCG
CCACACGTTT TGCTCGTCGA TCTGGAAGGG ACGCACTGGC CACTTCCGGC ACTGGAAGAG
TTGCTGAGCG TCTGCGGTCC CACCAGCCAG GTGATTGCCA CGGGCAAAGA GCAGGATGTT
GGCCTGTACC GTGCACTGCT TCAGGCGGGC GTGGTGGATT ATCTGGTGAA GCCGTTCACG
CTGGATCTGC TGGCGGCAAC GCTGGCGAAG TGTGAAGGCC AGCAGGCCGG GCCGGAATAT
GCTCGTACTG GCAGAACGAT TGCTGTCGTC AGCGCCAGCG GCGGAAGCGG CGGAAGTACT
GTGGCGATGG GACTGAGCCG TTTGCTGTCT GGTGAACGCC ATCTACCCGT AGCGCTGGTG
GATTTTGACC GCCGTAACGG TGACCAACTG CTGTTGCAGG GGCAAACCGA TGATGCGGGA
CTGGCTGCGG TGTTGGGGAC TCAGGAACTG GATACCCGGC TGCTTCAGCG CGCCATGCTG
CGTGTTGATA CACGCCTGCA CCTGTTGGCA CAGAAGCCAG AACTGGGTGA ACTGAGCCCG
GTTGACGTAG ATAACGTACT GAATCTCGGT GGTGCGTTGT GCCGTATGTT CAATCAGGTC
ATTTGGGATC TGCCCAGCAG CTACCCGACC GGTGCCCTGG ATGTGCTGAC TTATGCGGAT
CTGCGCATCA TCGTGACGGA ATTGACGCTT CAGGATGCGC GTAATGTGCG GCGCGTGCTG
AATGAGATCG GCGATGAAAG TGAAGGGCAG CGTCTGCTGC TGGTGCATAA CCAGAGCCGT
TTTGCCACAA CTGCACCGCT AAGTCGCGAT CAGTTCGAAC AATTTATCGG CCGGAAGATT
GATGTCGTGC TACCTAATGC CGGCCATGCG CTGGCGCAGA GCCTCGCTCT CGGCGCATTA
AATATTGCGG CAGCACCTGC TTTCCAACAG GGATTACGCC AATTGGTCGA TTTGGCCTGC
GGTGTGCGCA CCAGACAGGC GGAAAAACGC TGGTTCTCGC GTTGGTTAAA GCGAGCCTGA
|
|---|
| Protein sequence | MSEITPNDSD ELALPLVAFA NDVRDVADIS DLFTRLKQPD VPVMPGGITA ARQWCELNVP
PHVLLVDLEG THWPLPALEE LLSVCGPTSQ VIATGKEQDV GLYRALLQAG VVDYLVKPFT
LDLLAATLAK CEGQQAGPEY ARTGRTIAVV SASGGSGGST VAMGLSRLLS GERHLPVALV
DFDRRNGDQL LLQGQTDDAG LAAVLGTQEL DTRLLQRAML RVDTRLHLLA QKPELGELSP
VDVDNVLNLG GALCRMFNQV IWDLPSSYPT GALDVLTYAD LRIIVTELTL QDARNVRRVL
NEIGDESEGQ RLLLVHNQSR FATTAPLSRD QFEQFIGRKI DVVLPNAGHA LAQSLALGAL
NIAAAPAFQQ GLRQLVDLAC GVRTRQAEKR WFSRWLKRA
|
|---|
| |