| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0859 |
|---|
| Symbol | |
|---|
| ID | 8529231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 911668 |
|---|
| End bp | 912489 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | NLPA lipoprotein |
|---|
| Protein accession | YP_003258285 |
|---|
| Protein GI | 261820179 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAA AACAACTTAT GATGATGGCC TTCGCCTCGC TCACTGCGCT GATGTCGGTC
GGTGCAGTTG CGGATAGCAA ACTCGTGGTG GGGGCGTCCA ATGTGCCCCA TGCCGAGATT
TTGGAAGTGG CTAAGCCCAT TCTGAAAACA GAAGGGATCG ATTTGGAAAT CAAACGGTTT
CAGGATTACA TTCTGCCGAA TACTGCGCTT GCCAGTAAAG ATATCGATGC CAACTACTTC
CAGCATATTC CGTACTTGGA ATCGGTATTG AAAGATCATG CGGGCGATAA AACTTACGAT
TTTGTCAGCG CGGGAGGGAT TCATATCGAG CCAATTGGTA TCTACTCCAA AAAGTACAAA
AGCCTGAAAG ATCTGCCAGA AGGTGGCCGT ATTATCATGC GTGATGCTGT GGCGGAAGAA
GGCCGAATTC TTGCCATTTT TGAACGTGAA GGGGTGATTA AGCTAAAATC CAGCGTCAAC
AAGGTTAATG CTCGTATCTC GGATATCGTG GAAAACCCGA AAAAACTGAA GTTCCTGCCG
AATGTCGAAG GTGCGCTGCT GCCGCAGATG TACAATAACG ACGAAGGCGA TGCGGTGGTG
ATCAACGCTA ACTATGCTAT TGATGCTGGC CTGAACCCGA CCAAAGACCC GATCGCGGTG
GAGAGCGGTG AAAATAACCC GTATGCCAAT ATCATCACTG TACATAAAGG TGATGAAAAC
AAAAAAGAAA TTGTGGCGCT AGTGAAAGTG CTGCATTCCA AACAGATTCA GGATTTCATC
CGCGAGAAGT ATAAGGGCGC GGTTATCCCA GTCGATAAAT AA
|
|---|
| Protein sequence | MMKKQLMMMA FASLTALMSV GAVADSKLVV GASNVPHAEI LEVAKPILKT EGIDLEIKRF
QDYILPNTAL ASKDIDANYF QHIPYLESVL KDHAGDKTYD FVSAGGIHIE PIGIYSKKYK
SLKDLPEGGR IIMRDAVAEE GRILAIFERE GVIKLKSSVN KVNARISDIV ENPKKLKFLP
NVEGALLPQM YNNDEGDAVV INANYAIDAG LNPTKDPIAV ESGENNPYAN IITVHKGDEN
KKEIVALVKV LHSKQIQDFI REKYKGAVIP VDK
|
|---|
| |