Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0857 |
Symbol | |
ID | 8529229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 909976 |
End bp | 910992 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003258283 |
Protein GI | 261820177 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGTTC TTTCGAACGT AGGCAAGACT TTTGACAGCG CACATGGCCG CATTGTCGCA GTAGATGACG TGAATCTTAC GGTCGAGTTG GGGCAAATTT ACGGCATTAT TGGTTACAGC GGCGCGGGAA AAAGCACGCT GATCCGTTTG CTGAATGGAT TGGAAACGCC GACCAGCGGT AGCATCGTCA TCAACGGGTC TGATATTGCT CGCGCCAGTG CGGAAGAGTT GCGTCGTGCA CGCCTGAAAA TCAGCATGGT GTTCCAGCAC TTTAATCTAC TGTGGTCGCG TACCGTCAGT CAGAATATCG CTTTTGCCTT GCAAATTGCG GGTGCGCCAA AAGCCGAAAT TAAACGACGC GTTGCTGACT TGATTACGCT GGTGGGGTTG GAAGGGCGAG ATCACGCCTA TCCTTCCCAA CTGAGCGGAG GTCAGAAGCA GCGGGTCGGC ATTGCCCGTG CGCTGGCAAA CAATCCCAGT ATCTTGCTGT GTGATGAAGC GACCTCGGCG TTGGATCCGC AGACCACTGA TGCAATCCTC GAACTGCTGT TGGATATCAA CCGTAAACTG AATCTCACCC TTGTTCTCAT TACTCACGAA ATGCATGTGG TACGCAAAAT CTGCCATCGC GTCGCGGTGA TGGAAAATGG TCGGATTGTG GAAGAAGGCT CGGTACTGGA TGTATTTGTT CGCCCGCAGC AGGCGATTAC TCGCCAGTTT GTGAAGCAGT ATCAGAAAAT GGAAGAAAGT TTCAACCCAC TCCTGACAGA GCACCTGGCG GGCGCTGTGC TTAAATTGAC ATTCGTCGGT CAGCAAACGC ATCAGGCCAT TATTTCAGAA GTGATTCAGA CCTATCACCT GACGATAAAT ATTCTGCACG GCCAAATCAG CCATACGCTG AACGGATCGT TTGGTGAATT ATATATACAT GTTGAAGGCT GCGAACAGGA AACGGACCGC GTATTAACTT TCCTACAAGA ACGTGCGATT GCTGTTGAGG TGATTAAACA TGCTTGA
|
Protein sequence | MIVLSNVGKT FDSAHGRIVA VDDVNLTVEL GQIYGIIGYS GAGKSTLIRL LNGLETPTSG SIVINGSDIA RASAEELRRA RLKISMVFQH FNLLWSRTVS QNIAFALQIA GAPKAEIKRR VADLITLVGL EGRDHAYPSQ LSGGQKQRVG IARALANNPS ILLCDEATSA LDPQTTDAIL ELLLDINRKL NLTLVLITHE MHVVRKICHR VAVMENGRIV EEGSVLDVFV RPQQAITRQF VKQYQKMEES FNPLLTEHLA GAVLKLTFVG QQTHQAIISE VIQTYHLTIN ILHGQISHTL NGSFGELYIH VEGCEQETDR VLTFLQERAI AVEVIKHA
|
| |