| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0851 |
|---|
| Symbol | |
|---|
| ID | 8529223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 905640 |
|---|
| End bp | 906641 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | putative global regulator |
|---|
| Protein accession | YP_003258277 |
|---|
| Protein GI | 261820171 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAACC AACATACGGC TCATCAACGC CCTTTTGCCT CACACCCTCC ACTGACTTCC
GCTCAGCTCG ACGCCACGCT CATCTCACTG GATGATTGGG CGCTAGCCAC GCTGGTCGGG
CCGGATACCG TCAAATATCT TCAGGGACAG GTTACCGCGG ATGTCGGCGC ACTGGCTGAC
GATCGACACA TTCTTTGCGC CCACTGCGAC GCGAAAGGAA AAATGTGGAG CAACCTGCGC
CTGTTCCATC ACGGCGAGGG GTTTGCTTTC ATTGAGCGGC GTAATCTACG CGACGCTCAG
CTTAGCGAAC TGAAAAAATA CGCCGTTTTT TCGAAAACCA CCATCGCGCC AGACGACAGC
GCCGTGCTGC TGGGTGCAGC AGGAGCGGGC ATCCGCGAAC AGTTGGCCTC GGTATTTAAC
CAACTTCCAG ACGCTGAGCA TCCTGTCGTG CAGCACGAAG GTGCCACCTT ACTGCATTTC
ACTCATCCCG CAGAGCGTTT CCTGCTGGTG CTGTCTTCTG AGCAAAACGC TGCGTTGCTT
GAACAGCTCG ACGATAAAGT CAGCCTGAAT GACAGCCGCC AATGGCTGAC GTTGGATATT
GAAGCCGGTC AGCCCATCAT TGACAGCGCA AACAGTGCGC AGTTCATCCC GCAAGCGACT
AATTTACAGG CATTAAATGG AATTAGCTTC AGCAAAGGGT GCTATACCGG TCAGGAAATG
GTTGCTCGGG CAAAATATCG CGGGGCGAAT AAGCGTGCGC TCTACTGGCT GGCGGGTAAA
GCAAACCGGG TGCCGCAGGC GGGAGACGAT CTCGAACTGC AGCTTGGCGA GAACTGGCGT
CGTACCGGGA CAGTATTAGC AGCCAGCCAA TTGCAGAACG GTGACGTTTG GGTACAGGCA
GTGTTGAATA ACGATCTGAA CGCGGAGAAC GTGCTACGCG TGCGTGACGA CACCGAAAGC
CAGCTCACGG TTCAGCCTCT GCCGTATGAG ATCACGGATT AA
|
|---|
| Protein sequence | MVNQHTAHQR PFASHPPLTS AQLDATLISL DDWALATLVG PDTVKYLQGQ VTADVGALAD
DRHILCAHCD AKGKMWSNLR LFHHGEGFAF IERRNLRDAQ LSELKKYAVF SKTTIAPDDS
AVLLGAAGAG IREQLASVFN QLPDAEHPVV QHEGATLLHF THPAERFLLV LSSEQNAALL
EQLDDKVSLN DSRQWLTLDI EAGQPIIDSA NSAQFIPQAT NLQALNGISF SKGCYTGQEM
VARAKYRGAN KRALYWLAGK ANRVPQAGDD LELQLGENWR RTGTVLAASQ LQNGDVWVQA
VLNNDLNAEN VLRVRDDTES QLTVQPLPYE ITD
|
|---|
| |