Gene Pecwa_0847 details

Gene Information

• Locus tag: Pecwa_0847
• ID: 8529219
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 900506
• End bp: 902650
• Gene Length: 2145 bp
• Protein Length: 714 aa
• Translation table: 11
• GC content: 58%
• Product: glycoside hydrolase clan GH-D
• Protein accession: YP_003258273
• Protein GI: 261820167

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCGTG ATATTGTTCA ATTAACCAGC GCACAGTGTG ATGTTATCGT GCGCTGCGCC 
CCGGACGCAG AAATTCTCTA TTGGGGACCA CGGCTGTGCA GTTTTTCGCC AGAAGATGTC 
GTTTCCCTGC AACGCCCCGT CGCCAACGGT CGTCTGGATG TGGATCTCCC CCTGACGCTG 
GCGATGGAAT ACGGGCGTGG ACAGTTCGGC TCGCCGGGTA TTGAAGGGCA CCGAGCGGGC 
TATGATGCCG CGCCGATCTT CACAACAACG CAGGTTGACG TTCAAGACAA CACACTCACT 
ATCACAGCAG ACGATACGCA GGCTGGTCTT CGCCTGACCA GCGAACTGCA TCTGGACCCG 
CAGACCGATG TACTGCAACT GCGCCACACG CTACAGAATT TGCGTACTGA TGCCTGGCAA 
GTGCAGCGTC TCGCCGTCAC GTTGCCTGTC CCGGAACGGG CGTACGATGT CATGGCGTTT 
CACGGCCGCT GGCTGCGTGA GTTTCAGGCT CACCGCCTCA CGTTGCAGCA CGGCGGTTTT 
ATTCAGGAAA GCCGTCGGGG AAGAAGCTCA CACGAATATT TCCCGGCGCT AATTCTCGGC 
GAGCCTGCGT TCAGCGAACA ACGCGGTTCG GTATGGGGTG TACATTTAGG CTGGAGCGGC 
AACCATCGGC TGCGTGCCGA TATCAAAACC GACGGACGCC GCGTCGTACA GGCAGAAGCC 
CTTTATCTGC CGGGTGAAAT CACGCTGGCG CAGTCGGAAT CGCTTACGAC ACCGTGGGTG 
TACGCGGCCT TCTCCGATAC CGGCTTGAAC GGCATGAGCC AGCGCTATCA CACCTTCCTG 
CGCCAATCGC TGATCCAGTT CTGCGGCGAT AAGCCACGCC CGGTACACCT CAATACGTGG 
GAAGGGATCT ATTTCGATCA CGACCCTGAA TACATCATGC AAATGGCGAG CAAAGCCGCC 
GATGTCGGCG TAGAGCGCTT CATTATCGAT GACGGCTGGT TTCGCGGACG CCATCACGAC 
CGAGCCGCGC TCGGCGACTG GTATCTGGAT GAGGAAAAAT ACCCTAACGG GCTGATGCCA 
GTGATTGAGC ATGTCAAAGC CTTGGGGATG GAGTTCGGCA TTTGGGTCGA ACCGGAGATG 
ATTAACCCTG ATTCCGACCT GTTCCGCGCG CATCCCGACT GGGTACTGCA ATTGCCCGGC 
TACGAGCAAC CCACTGGCCG TTATCAGTAT GTACTGAATT TAAACCAGCC CGACGCCTTC 
GCTTATTTAC TGGAGCGGCT GAGCTGGCTA CTGGGCGAGC ACCCTGTCGA TTATGTGAAA 
TGGGATATGA ACCGCGAACT GGTGCAGCCC GGCCATGAAG GACGACTGGC TGCCGATGCG 
CAAACCCGAC AGTTCTATCG CCTGCTCGAT ACCCTGCGCC AGCGTTTTCC CCATGTTGAA 
TTTGAATCCT GCGCCTCCGG CGGCGGCCGC ATCGATTACG GCGTGCTTGA GCGTACCCAG 
CGCTTCTGGG TGTCAGATAA CAACGATGCG CTGGAGCGCC AGACGATCCA ACGCGGCATG 
AGCTACTTCT TTCCACCAGA AGTGATGGGG CAACACATCG GCCACGCGCG CTGCCACGCG 
ACGTATCGGC GTCATACCAT CGCCTTTCGC GGCTTGACCG CTCTGTTCGG CCACATGGGA 
ATCGAGCTGG ATCCTGTCAA AGCGGATGAC GACGAACTGG AAGGCTATCG CCACTACATC 
CAGTTGCATA AGACGCTGCG TCCGCTGCTG CACAGCGGCA CCACCTGGCG GGTAGAGATG 
CCGGACGATA CGGTGCAGGC CACCGGCGTG GTGAGCAACG ATCGACAACA TGCCGTTTTC 
CAAATCGCCC AGTTGCGCAT GCCAGATTAT TCGCTGGCAG GCACGCTCCG CTTCCCCGGC 
CTGCTGCCCA ACACACGCTA TGAAGTCAAA CTATTGGATG GCCCAGAGAT CAAAACGGTA 
CGCGAAGGTG GTGGCACCAT GCGAGAGCTT CCACCCTGGT TACGTCAGCC GATCGTGGTT 
TCCGGCGACT GGCTGATGCA GGCCGGCCTT GCCCTGCCCG TCCTGACGCC AGAAACCGCC 
ATTCTGATCG GGCTTTCCGC GGTGCGGGAT ACCGTCAGCA AATAA 

 

Protein sequence

MKRDIVQLTS AQCDVIVRCA PDAEILYWGP RLCSFSPEDV VSLQRPVANG RLDVDLPLTL 
AMEYGRGQFG SPGIEGHRAG YDAAPIFTTT QVDVQDNTLT ITADDTQAGL RLTSELHLDP 
QTDVLQLRHT LQNLRTDAWQ VQRLAVTLPV PERAYDVMAF HGRWLREFQA HRLTLQHGGF 
IQESRRGRSS HEYFPALILG EPAFSEQRGS VWGVHLGWSG NHRLRADIKT DGRRVVQAEA 
LYLPGEITLA QSESLTTPWV YAAFSDTGLN GMSQRYHTFL RQSLIQFCGD KPRPVHLNTW 
EGIYFDHDPE YIMQMASKAA DVGVERFIID DGWFRGRHHD RAALGDWYLD EEKYPNGLMP 
VIEHVKALGM EFGIWVEPEM INPDSDLFRA HPDWVLQLPG YEQPTGRYQY VLNLNQPDAF 
AYLLERLSWL LGEHPVDYVK WDMNRELVQP GHEGRLAADA QTRQFYRLLD TLRQRFPHVE 
FESCASGGGR IDYGVLERTQ RFWVSDNNDA LERQTIQRGM SYFFPPEVMG QHIGHARCHA 
TYRRHTIAFR GLTALFGHMG IELDPVKADD DELEGYRHYI QLHKTLRPLL HSGTTWRVEM 
PDDTVQATGV VSNDRQHAVF QIAQLRMPDY SLAGTLRFPG LLPNTRYEVK LLDGPEIKTV 
REGGGTMREL PPWLRQPIVV SGDWLMQAGL ALPVLTPETA ILIGLSAVRD TVSK