| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0825 |
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| Symbol | |
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| ID | 8529194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 875411 |
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| End bp | 877690 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003258251 |
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| Protein GI | 261820145 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000404003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGAGT CATTAATATC ATCACGCCCA TCCTTGCGTG CCGGGCTTCG TTCGCCAAAT
TTGCTGGCGT TGTTTATTGG TTCCATATGC AGCGGCATGG CCATGCCGCT GTTGGCTGCA
CAGCAGCCAA CAGCGATACA AGCGGCTGAT TCAGCGAAAG CATCGGAAGT TACTGATGGT
AAGGATACGA TTACCGTTGT CGCGAAACCG GGAAATACGT TCCGCGCTGG CGGCGACGAT
CTGGTTCCCG CCTATCTGGA TGGACAAATT GCCAACGGTG GGCGCGTGGG TTTTCTGGGG
CAACAAAATG CGCGCGATGT GCCGTTTAAT GTGATTAGCT ATACCGACAA GATGATCCTC
TCACAGCAGG CGGAAACGCT GGCTGATGTT GTTAAAAACG ATGCCTCTAT CCAAACGTTG
AGAGGTTTTG GTAACTTTGC GGAAACGTAC CGCATCCGTG GTTTCCTGCT GGATGGTGAT
GATATCACCT TTGGCGGGTT GTATGGTGTG ATGCCTCGCC AAATGGTGTC GACCAACATG
GTCGAACGTG TGGAGGTTTT CAAAGGAGCG AATGCCTTCG CCAACGGTGT CTCTGGTAGC
GGAACTGGCA GCGGGGTGGG CGGATCGGTT AACGTTGAAC CAAAGCATGC TACTGACGAT
CCTCTGACTC GAATGACCGT GGATTATGAA TCCAAGAATA AAGTGGGCGG TGGATTAGAC
GTCGGTCGCC GCTTCGGTGA TGACAATCAG TTTGGAGTGC GCGTCAACGT CCTGCATCGG
GAAGGCGAAA GTGCCATTCA CCATCAAAAA GATCGTATGT CGATGGCTTC TGTTGGCCTT
GATTACCGCG GCGATCGCTT CCGCTCCTCG TTGGATGCGG GCTATCAGCA CCAGTCCGTG
CACGGTGGGC GCATTGGCAT AGGGATTGGG AACGCCACCG TAGTCCCTTC TGTGCCTGAT
GCAACGTTGA ATTATAGCCC TAATTGGGTT TCATCCGATC TGAAAACTAC TTTCGGTATG
TGGCGTAGCG AATATGACTT TGCTGATGCC TGGACAGTGT ATTCAGGAAT TGGTAGTAGT
CGAGCCGATG AGTCAGGAAA TTATGGGGTG CCAAAGCTTA CGGATAACAA CGGCAATGCT
TCGATATCGC GTATGGGTGT TCCTTTTATT CGCGATACGT TTTCTGGTCT GTTAGGTATC
CGTGGGCAGT TTGATACGGG GTTTATTACT CATAAAGTTA ATCTTGGATA TTCAGGTGTT
TATGCGAAGA ATCGTTCAGC TTATGACATG TCGGTCACGG ATCCGACCAA TATCTACCAT
CCTGATCAGA TAGGCTACCC GTCGGCGCAG TTCCGTGGCG GGGATATGAA CAGTCCAAAG
GTACGCCTGC GAATCAGAAG CAGTGGTTTA GCCGTATCAG ATACGCTCTC CGCATGGGAT
GATAAAGCTG CATTAACGCT GGGTCTGCGT CGCCAGGAGA TCATGGTGCG TAATTATACT
TATGCGGGTG TCGAAGAGCC GAACAGTGCC TTTAATCGTA CTAAAGTGAC TCCAGCGTAT
GGTTTGGTCG TGAAACCATG GGAAAATGTT TCGCTGTACG CTAACCACAT TGAGGCGCTT
TCTCCGGGTA AAACCGCGCC AACTAAGTTT GATACTACAG CGGTTACCAA TGGCGGAAAT
GTTACCGGCG TCTATGTCGC AAAACAAAAC GAAGTTGGCG TGAAGTTTGA TTATGAACGA
GTAGGGGGAT CGCTGGCTTT GTTTGAAATT GAGCGCCCAT ACGAAACCGT GAACCGTTCG
ACGATGGTTT ACGGTCTTTA CGGCGAACGC CGCCATCGTG GTATGGAGCT TAATGTGTTT
GGTGAGCCCG TATTTGGTCT GCGACTGAAC GGCAGCGCGA CATGGATTGC TGCTCAGCAG
ATTAAAACGC AAGACGGTAG CAGTGATGGT AACGATGTTC CCGGTGTGCC CCGTTATCAA
CTGGTGTTTG GGTCGGAATA TGATATCAAA CAGGTGGAAG GCTTAACGCT GGCGGGTACA
GTGATCCGTT CGGGGTCGCA ATATGTCAAC GCCGACAATT CCCTGAAGTT GAAGCCTTGG
ACGCGTCTGG ACCTGGGGGT ACGTTATAGT ACACCGATGA ACGATCATAC GCTGGTATGG
CGCGCCAACG TCGAAAATGT CACTAATGAA AAATATTGGT CGTCAGTGAA CGATACGGGT
GTTTACCTTT ATCAGGGCGA TCCGCGTTCA CTGAAGCTAT CTATGTCAAT TGACTTCTAA
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| Protein sequence | MLESLISSRP SLRAGLRSPN LLALFIGSIC SGMAMPLLAA QQPTAIQAAD SAKASEVTDG
KDTITVVAKP GNTFRAGGDD LVPAYLDGQI ANGGRVGFLG QQNARDVPFN VISYTDKMIL
SQQAETLADV VKNDASIQTL RGFGNFAETY RIRGFLLDGD DITFGGLYGV MPRQMVSTNM
VERVEVFKGA NAFANGVSGS GTGSGVGGSV NVEPKHATDD PLTRMTVDYE SKNKVGGGLD
VGRRFGDDNQ FGVRVNVLHR EGESAIHHQK DRMSMASVGL DYRGDRFRSS LDAGYQHQSV
HGGRIGIGIG NATVVPSVPD ATLNYSPNWV SSDLKTTFGM WRSEYDFADA WTVYSGIGSS
RADESGNYGV PKLTDNNGNA SISRMGVPFI RDTFSGLLGI RGQFDTGFIT HKVNLGYSGV
YAKNRSAYDM SVTDPTNIYH PDQIGYPSAQ FRGGDMNSPK VRLRIRSSGL AVSDTLSAWD
DKAALTLGLR RQEIMVRNYT YAGVEEPNSA FNRTKVTPAY GLVVKPWENV SLYANHIEAL
SPGKTAPTKF DTTAVTNGGN VTGVYVAKQN EVGVKFDYER VGGSLALFEI ERPYETVNRS
TMVYGLYGER RHRGMELNVF GEPVFGLRLN GSATWIAAQQ IKTQDGSSDG NDVPGVPRYQ
LVFGSEYDIK QVEGLTLAGT VIRSGSQYVN ADNSLKLKPW TRLDLGVRYS TPMNDHTLVW
RANVENVTNE KYWSSVNDTG VYLYQGDPRS LKLSMSIDF
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