| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0823 |
|---|
| Symbol | |
|---|
| ID | 8529192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 873258 |
|---|
| End bp | 874481 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | phosphopentomutase |
|---|
| Protein accession | YP_003258249 |
|---|
| Protein GI | 261820143 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.2985 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTG TACATATTAT GATTCTCGAC TCGTTTGGCA TTGGCAGCAG TGCTGATGCA
GAACGCTTTG GTGATGTAGG TTCGGATACG CTGGGCCATA TTGCTCAGGC GTGTGCGGCG
GGAACGGCGA ATAAAGGGCG CAGCGGTACG CTGCATTTGC CAAACCTGAG CCGTCTGGGT
CTGGGGAAAG CCGCTGAAGC CTCAACGGGA ACCTTTCCGG CAGGGCTGGA TGAAAACGCA
GAAATTATCG GTGCTTACGC GCACGCCAGT GAAATCTCTT CGGGTAAAGA TACGCCGTCT
GGTCACTGGG AAATTGCTGG TGTACCTGTC CTATTCGATT GGGGCTATTT TAAAGATGAA
GAAAACAGTT TTCCGCAGGA ACTGTTGGAT AAACTGGTAA AACGCGCCAA CCTGCCGGGC
TATCTGGGCA ACTGCCACTC TTCTGGTACG GTGATTCTGG ATCAGTTGGC TGAAGAACAC
ATGAAAACCG GTAAGCCGAT TTTCTACACC TCTGCGGATT CTGTGTTTCA GATCGCCTGT
CATGAAGAGA CGTTCGGTTT GGATAAGCTG TATGAGCTGT GTGAGATTGC CCGCGAAGAG
CTGACCGAAG GGGGTTACAA CATCGGGCGC GTGATTGCGC GTCCGTTTAT CGGTGACAAA
CCCGGTAACT TCGAGCGTAC TGGCAACCGT CACGACCTGG CCGTTGAACC GCCAGCGCCG
ACCATCCTGA AAAAGCTGGT GGATGAAAAA GGCGGTGAAG TGGTTTCTGT CGGTAAAATT
GCGGATATCT ACGCGCAGGT TGGTATCACG AAGAAAGTGA AGGCTACCGG CATTGATGCG
CTGTTTGACG CCACGCTGAA AGAGATGGAT AGCGCGGGCG ACAACACGAT CGTGTTTACC
AACTTTGTTG ATTTCGACTC CGCCTACGGT CACCGCCGCG ATATTCCGGG CTATGCGGCC
GCGTTGGAGT TGTTCGATCG CCGTTTGCCT GAGTTGATGT CCCGCGTGAA AGGCGATGAC
ATCCTGATTC TGACGGCCGA CCACGGCTGT GACCCGAGCT GGCACGGCAC CGATCATACC
CGCGAAAACG TACCGGTGTT GATCTATGGG CCGAAAGTGA AGCCGGGCTC ATACGGTCAC
CGTAAAACCT TCGCCGATAT CGGGCAGACG GTTGCGGCCT ACTTTGGCCT GTCGCCTATG
GACTACGGCA AATCGATACT GTAA
|
|---|
| Protein sequence | MKRVHIMILD SFGIGSSADA ERFGDVGSDT LGHIAQACAA GTANKGRSGT LHLPNLSRLG
LGKAAEASTG TFPAGLDENA EIIGAYAHAS EISSGKDTPS GHWEIAGVPV LFDWGYFKDE
ENSFPQELLD KLVKRANLPG YLGNCHSSGT VILDQLAEEH MKTGKPIFYT SADSVFQIAC
HEETFGLDKL YELCEIAREE LTEGGYNIGR VIARPFIGDK PGNFERTGNR HDLAVEPPAP
TILKKLVDEK GGEVVSVGKI ADIYAQVGIT KKVKATGIDA LFDATLKEMD SAGDNTIVFT
NFVDFDSAYG HRRDIPGYAA ALELFDRRLP ELMSRVKGDD ILILTADHGC DPSWHGTDHT
RENVPVLIYG PKVKPGSYGH RKTFADIGQT VAAYFGLSPM DYGKSIL
|
|---|
| |