Gene Pecwa_0812 details

Gene Information

• Locus tag: Pecwa_0812
• ID: 8529181
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 860887
• End bp: 863007
• Gene Length: 2121 bp
• Protein Length: 706 aa
• Translation table: 11
• GC content: 52%
• Product: polynucleotide phosphorylase/polyadenylase
• Protein accession: YP_003258238
• Protein GI: 261820132

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.2264
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCTGAATC CGATCGTTCG TAAGTTTCAA TATGGTCAGC ATACCGTCAC GCTAGAGACC 
GGTATGATGG CACGCCAGGC TACCGCCGCT GTAATGGTAA GCATGGATGA CACTGCGGTA 
TTCGTTACCG TTGTCGGCGC TAAAAATGCT AAACCAGGCC AAAGTTTCTT CCCGTTGACG 
GTTAACTATC AGGAGCGTAC CTACGCTGCT GGACGTTTCC CCGGTGGTTT TTTCCGCCGT 
GAAGGTCGCC CAAGCGAAGG CGAAACGCTG ATTTCTCGTC TGATTGACCG TCCGATTCGC 
CCTCTGTTCC CAGAAGGCTT CCTGAATGAA GTTCAGGTGA TTGCCACTGT CGTTTCCGTT 
AACCCACAGG TTAACCCTGA CATCGTTGCC ATGATTGGTG CTTCTGCGGC GCTGAGCCTG 
TCTGGTATCC CGTTCAGCGG TCCTATCGGT GCAGCACGCG TCGGTTACCT GAACGACCAG 
TATGTCCTGA ACCCAACGAC AGATGAGCTG AAAGAAAGCC GTCTGGATCT GGTTGTTGCA 
GGTACACAAG GCGCAGTTCT GATGGTGGAA TCAGAAGCTG AAGTGCTGAG TGAAGATCAG 
ATGCTGGGTG CAGTCGTGTT TGGTCACGAC CAACAGCAGA TCGTTATCGA AAACATCAAC 
TCACTGGTTG CAGAAGCGGG CAAACCGAAG TGGGAATGGC ATGCGCCAGA AGTTAATATT 
TCTTTAGAGC AACGTGTACA GGCTCTGTCT GAAGCACGTT TGGGTGACGC TTACCGTATC 
ACCGAAAAAC AAGAGCGTTA TGCACAAGTT AACGTCATCA AAGCTGACGT TGTTGCTGCG 
CTGCAAGCCG AAGATGAAAC GCTGAATGCT GGTGAGATCC AGGAAATTCT GGGCAACATC 
GAGAAAAATG TCGTGCGTAG CCGTGTACTG GCTGGCGAAC CGCGTATCGA TGGCCGTGAA 
AAAGACATGA TTCGTGGTCT TGATGTGCGT ACTGGTGTAC TGCCACGTAC CCACGGTTCT 
GCGTTGTTCA CCCGTGGTGA AACGCAGGCG CTGGTAACTG CAACGTTGGG TACTGAGCGT 
GACGCGCAGA CTATCGACGA ACTGACCGGT GAACGTACCG ATCGCTTCCT GCTACACTAC 
AACTTCCCTC CGTACTCTGT CGGTGAAACC GGGATGGTTG GCTCGCCTAA GCGTCGTGAA 
ATTGGTCACG GTCGTCTGGC TAAGCGCGGT GTGTTGGCTG TTATGCCGAA GGCGAACGAA 
TTCCCGTACA CCGTGCGTGT GGTCTCTGAA ATCACGGAAT CTAACGGTTC TTCTTCCATG 
GCGTCTGTCT GCGGTGCTTC TCTGGCACTG ATGGATGCAG GTGTGCCGAT CAAATCAGCC 
GTTGCGGGTA TCGCGATGGG TCTGGTGAAA GAAGGCGACA ACTTTGTTGT TCTGTCCGAC 
ATTCTGGGTG ATGAAGATCA TCTGGGCGAT ATGGACTTTA AAGTTGCTGG TAGTCGTGAA 
GGTATCACTG CGCTGCAGAT GGATATCAAG ATCGAAGGGA TTACCCGTGA GATCATGCAG 
GTTGCTTTGA ATCAAGCCAA GGGTGCGCGT TTGCACATTC TGGGTGTGAT GGAGCAGGCA 
ATCAGCACGC CGCGTGGCGA TATCTCTGAA TTCGCACCGC GTATTCACAC CATCAAAATC 
AGTACCGATA AGATCAAAGA TGTGATTGGT AAAGGTGGTT CTGTGATCCG TGCGCTGACG 
GAAGAGACTG GCACGACTAT TGAAATTGAA GACGATGGTA CTGTGAAGAT CGCTTCAACT 
GACGGCGAAA AAGCAAAACA CGCAATTCGT CGTATTGAAG AGATCACTGC CGAAATCGAA 
GTTGGCCGCG TGTATCAGGG TAAAGTGACT CGCATCGTTG ACTTTGGTGC TTTCGTCGCT 
ATTGGCGGTG GCAAAGAAGG CCTGGTGCAT ATTTCTCAGA TCGCTGACAA GCGCGTAGAG 
AAAGTGACTG ACTACCTGCA GATGGGTCAG GAAGTGCCGG TCAAGGTTCT GGAAGTTGAT 
CGTCAGGGCC GCGTGCGCTT AAGCATCAAA GAAGCCAATG CACAAACTCA GGAAGCGGCA 
GCTCCGTCTT CTGAGGAATA A 

 

Protein sequence

MLNPIVRKFQ YGQHTVTLET GMMARQATAA VMVSMDDTAV FVTVVGAKNA KPGQSFFPLT 
VNYQERTYAA GRFPGGFFRR EGRPSEGETL ISRLIDRPIR PLFPEGFLNE VQVIATVVSV 
NPQVNPDIVA MIGASAALSL SGIPFSGPIG AARVGYLNDQ YVLNPTTDEL KESRLDLVVA 
GTQGAVLMVE SEAEVLSEDQ MLGAVVFGHD QQQIVIENIN SLVAEAGKPK WEWHAPEVNI 
SLEQRVQALS EARLGDAYRI TEKQERYAQV NVIKADVVAA LQAEDETLNA GEIQEILGNI 
EKNVVRSRVL AGEPRIDGRE KDMIRGLDVR TGVLPRTHGS ALFTRGETQA LVTATLGTER 
DAQTIDELTG ERTDRFLLHY NFPPYSVGET GMVGSPKRRE IGHGRLAKRG VLAVMPKANE 
FPYTVRVVSE ITESNGSSSM ASVCGASLAL MDAGVPIKSA VAGIAMGLVK EGDNFVVLSD 
ILGDEDHLGD MDFKVAGSRE GITALQMDIK IEGITREIMQ VALNQAKGAR LHILGVMEQA 
ISTPRGDISE FAPRIHTIKI STDKIKDVIG KGGSVIRALT EETGTTIEIE DDGTVKIAST 
DGEKAKHAIR RIEEITAEIE VGRVYQGKVT RIVDFGAFVA IGGGKEGLVH ISQIADKRVE 
KVTDYLQMGQ EVPVKVLEVD RQGRVRLSIK EANAQTQEAA APSSEE