Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0797 |
Symbol | |
ID | 8529164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 843941 |
End bp | 845374 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | D-alanyl-D-alanine carboxypeptidase/endopeptidase |
Protein accession | YP_003258223 |
Protein GI | 261820117 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00129022 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTTTTT CATCGATTGT TACCGGATTT GCCTGCGCTT TTGTTCTGCA TGCCAATGCA GCTTCAGTTG AGGATCATCG TCAATATTTA CCTGATGGTG CCAATTTGGC GTTATTGGTA CAGAAAGTTG GCGCAACAAC ACCCAGCATG GCCTTCAATA GCCAGCAAAT GGCGCTTCCC GCCAGTACAC AAAAGGTGAT AACCGCATTA GCTGCATTGC TACAATTGGG CCCAGATTAT CGATTCATCA CCACGATGGA AAGCCACGGT CCTGTCTCCA GAGGAATTCT GAACGGTAAC CTCATTGTAC GGTTTAGCGG TGATCCAACC CTGAAACGCC AGCAAATACG GAATATGGTG CAAGAATTAA GGAAACGAGG AATACAGGAA ATTGCAGGTG ATGTGTTGAT CGATACTTCG GTATTTGCCA GTCACGACAA AGCACCAGGC TGGCCATGGA ACGATATGAC ACAGTGTTTC AGCGCCCCGC CGGGTGCTGC CATTGTCGAT CGCAACTGTT TTTCCGTTTC GCTCTACAGT GCCCCTAAAG CAGGTGATAA TGCATTCATT CGCGTCGCTT CCTATTATCC AGTGCAAATG TTCAGCGAAG TGCGCACGCT GGCTAAAGGA TCTTCCGATG CTCAATACTG TGAACTGGAT GTGGTTCCCG GAGAATTGAA TCGCTTTACG CTCACTGGCT GCCTGACTCA GCGCACCGAT CCCCTTCCGC TGGCGTTCGC TATTCAAGAT GGAGCAAGCT ACGCCGGCGC AATCGTTAAA GATGAACTTC AGCAGGCAGA TATCCGCATT AAAGGCAGCT TACGCCGACA GGCACAGCCA AGTGCAGCAG GAAGCGTGCT TGCCCAGACA CAATCAGCGC CACTGCATGA TCTTCTCACT ATCATGCTGA AAAAATCCGA CAATATGATT GCCGATACGG TCTTTCGCAC CATTGGGCAT GAACGCTTTA GCGTACCAGG AACGTGGCGC GCAGGGGCCG ACGCCGTGCG TCAGATTCTT CGTCAGAAAG CTGGTGTAGA TTTAGGAAAT AGTATTGTTG TTGACGGTTC AGGCCTGTCA CGACACAACC TGATTTCGCC AGAAACGATG ATGCAGGTAT TACAGTACAT CGCACAGCAC GATAATCAGC TAAATTACAT CACGATGCTT CCACTTTCAG GCTATGACGG CACATTGCGT TACCGTGGCG GCCTGCATGA AGCTGGCGTT GATGGCAAGG TTTCGGCTAA AACAGGGGCC TTACAGGGCG TATACAATCT GGCAGGTTTC ATTACCACCG CAAGCGGCCA GCGTATGGCA TTCGTTCAGT TCCTGTCCGG CTATGCCGTA CCGCCAGAAG ATCAGAGCGC ACGCCGCGTC CCTCTGGTGA GATTTGAAAG CCGCCTCTAC AAAGACATTT ATCAGAGTAA TTAA
|
Protein sequence | MRFSSIVTGF ACAFVLHANA ASVEDHRQYL PDGANLALLV QKVGATTPSM AFNSQQMALP ASTQKVITAL AALLQLGPDY RFITTMESHG PVSRGILNGN LIVRFSGDPT LKRQQIRNMV QELRKRGIQE IAGDVLIDTS VFASHDKAPG WPWNDMTQCF SAPPGAAIVD RNCFSVSLYS APKAGDNAFI RVASYYPVQM FSEVRTLAKG SSDAQYCELD VVPGELNRFT LTGCLTQRTD PLPLAFAIQD GASYAGAIVK DELQQADIRI KGSLRRQAQP SAAGSVLAQT QSAPLHDLLT IMLKKSDNMI ADTVFRTIGH ERFSVPGTWR AGADAVRQIL RQKAGVDLGN SIVVDGSGLS RHNLISPETM MQVLQYIAQH DNQLNYITML PLSGYDGTLR YRGGLHEAGV DGKVSAKTGA LQGVYNLAGF ITTASGQRMA FVQFLSGYAV PPEDQSARRV PLVRFESRLY KDIYQSN
|
| |