| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0783 |
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| Symbol | |
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| ID | 8529150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 830672 |
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| End bp | 832507 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | RNA polymerase sigma factor RpoD |
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| Protein accession | YP_003258209 |
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| Protein GI | 261820103 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.060586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCAAA ACCCGCAGTC ACAGCTTAAA CTGCTTGTCA CCCGTGGTAA GGAGCAAGGC
TACCTGACCT ATGCTGAGGT CAATGACCAT CTGCCGGAAG ATATCATCGA CTCGGATCAG
ATCGAAGATA TCATCCAGAT GATTAACGAC ATGGGCATCC AGGTGATGGA AGAAGCGCCT
GATGCAGACG ATCTGCTGCT GGCCGAAAAC ACCAATGATG CCGATGAAGA TGCGGCAGAG
GCTGCTGCGC AGGTTCTATC CAGTGTTGAA TCGGAAATTG GTCGTACTAC CGATCCGGTT
CGCATGTACA TGCGTGAAAT GGGTACCGTT GAGCTGTTGA CGCGTGAAGG CGAGATCGAT
ATCGCCAAGC GTATTGAAGA CGGTATCAAC CAGGTTCAGT GCTCTGTCGC CGAGTATCCT
GAGGCCATTA CCTACCTGCT GGAACAATAC GATCGCGTCG AAGCGGGTGA AAGTCGCCTG
TCCGATCTGA TCATCGGTTT CGTCGATCCT AATGCGGAAG AAGACATTGC CCCTACCGCG
ACCCACGTTG GTTCCGAGCT TTCGAGCGAA GAAATAAGCG ATGATGACGA GGAAGAAGAC
GAAGACGAGG AAGAAGACGA CAACAGTATC GATCCTGAAC TGGCGCGTGA GAAGTTCACT
GAACTACGTG AGCAATATGA AACAACCCGT CAGGTGATCA AAGCCCACGG TCGCAGTCAT
GCGCTGGCCG CACAGGAAAT TCTGAACCTG TCTGAAGTGT TCAAACAGTT CCGTCTGGTA
CCGAAACAGT TCGATTTCCT GGTTAACAGC ATGCGCTCTA TGATGGATCG CGTTCGTACT
CAAGAGCGTT TGATCATCAA GTTGTGCGTT GAACAATGCA AAATGCCGAA GAAAAACTTC
GTCACCATGT TCACTGGCAA TGAAACCAAC AACAGTTGGT TTGCCGCAGC AGTAGCAATG
GGCAAACCCT GGTCTGAAAA GCTGAATGAT GTTGAAGAAG ACGTCACCCG CAGCCTACAG
AAACTGCAGC AGATCGAAGA AGAAACCGGT CTGACGATCG AGCAGGTTAA AGACATCAAC
CGCCGTATGT CGATTGGTGA GGCAAAAGCA CGTCGCGCCA AGAAAGAAAT GGTGGAAGCC
AACCTGCGTC TGGTTATTTC TATCGCGAAG AAATACACCA ACCGTGGTTT GCAGTTCCTC
GACCTGATTC AGGAAGGTAA CATCGGTCTG ATGAAAGCGG TAGATAAGTT CGAATATCGC
CGTGGTTACA AATTCTCGAC CTATGCGACC TGGTGGATTC GTCAGGCAAT TACCCGTTCT
ATCGCCGATC AGGCGCGTAC CATCCGTATT CCGGTACACA TGATTGAGAC GATCAACAAG
CTGAATCGTA TCTCTCGTCA GATGTTACAG GAAATGGGTC GTGAACCGAC GCCGGAAGAG
CTGGCCGAAC GCATGCTGAT GCCGGAAGAC AAGATCCGCA AAGTGCTGAA GATCGCGAAA
GAGCCGATTT CAATGGAAAC CCCAATTGGT GATGATGAAG ATTCACACTT GGGCGATTTC
ATCGAAGATA CGACGCTGGA GCTGCCGCTG GATTCCGCCA CGTCGGAAAG CCTGCGTTCG
GCGACACACG ACGTACTGGC TGGCCTGACT GCGCGTGAAG CGAAAGTCCT GCGTATGCGT
TTCGGTATCG ATATGAACAC CGACCATACG CTGGAAGAAG TCGGCAAACA GTTTGACGTT
ACGCGTGAAC GTATTCGTCA GATCGAAGCA AAAGCGCTGC GTAAACTGCG CCACCCAAGC
CGTTCTGAAG TGCTGCGTAG CTTCCTGGAT GATTAA
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| Protein sequence | MEQNPQSQLK LLVTRGKEQG YLTYAEVNDH LPEDIIDSDQ IEDIIQMIND MGIQVMEEAP
DADDLLLAEN TNDADEDAAE AAAQVLSSVE SEIGRTTDPV RMYMREMGTV ELLTREGEID
IAKRIEDGIN QVQCSVAEYP EAITYLLEQY DRVEAGESRL SDLIIGFVDP NAEEDIAPTA
THVGSELSSE EISDDDEEED EDEEEDDNSI DPELAREKFT ELREQYETTR QVIKAHGRSH
ALAAQEILNL SEVFKQFRLV PKQFDFLVNS MRSMMDRVRT QERLIIKLCV EQCKMPKKNF
VTMFTGNETN NSWFAAAVAM GKPWSEKLND VEEDVTRSLQ KLQQIEEETG LTIEQVKDIN
RRMSIGEAKA RRAKKEMVEA NLRLVISIAK KYTNRGLQFL DLIQEGNIGL MKAVDKFEYR
RGYKFSTYAT WWIRQAITRS IADQARTIRI PVHMIETINK LNRISRQMLQ EMGREPTPEE
LAERMLMPED KIRKVLKIAK EPISMETPIG DDEDSHLGDF IEDTTLELPL DSATSESLRS
ATHDVLAGLT AREAKVLRMR FGIDMNTDHT LEEVGKQFDV TRERIRQIEA KALRKLRHPS
RSEVLRSFLD D
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