Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0648 |
Symbol | |
ID | 8529013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 687663 |
End bp | 689492 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | type VI secretion system Vgr family protein |
Protein accession | YP_003258079 |
Protein GI | 261819973 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAAACA GTACAGGATT ACAGTTCACG GTAAAGGTCG GGGCATTGCC TGCATCAACC TTTGCCGTGG TGGATTTTCA GCTCAGCGAG GCACTTAACC AGCCGTTTGC CCTGTCGCTG AATCTGGCGA GTGCCTTGCC GGATGTGGAT TTCGGCGCTG TGCTCGACCA GCCGTGTGAG TTGATGGTGT GGTATGAAGG CGTACTCCAA CGGCGAGTGA GCGGCATTAT CAGTGCCTTC GCGCAGGGTG ACACCGGCTT TCGCCGCACG CGCTATCAGG CAGAGGTTCG CCCGGCACTG TGGCGGTTGG GACTGCGTAC CAATGCCCGT ATCTTTCAGG CGCAAAAGCC GGAGGCCATT ATCGGGACGT TGCTGGAAGA GTCTGGTATT ACCGATTATG CCTTTGCGCT ACGTCACGAC CACGCCCCGC GCGAATACTG CGTACAGTAT CGCGAAAGTG ATTTGGCGTT TGTCACCCGT CTGGCCGCAG AGGAAGGTCT GTACTTCTTC CATGAGTTTG AAGAAGGTAA GCACCGCGTC GTCTTTGCCG ATGATGCCGG AGCGCTCAGC AAAGGCCCGG AACTGTTCTT CAACCTCGCC ACGCAGGGAC TGAGCGAAGG CGAATACGTC CGCCGTTTCC GCTACGCCGA AGCCGTCAGT ACCGCAGAAG TCGCCCTCAA AGACTACAGC TTCAAAACGC CCGCGTATGG CCTGCTGCAC AGCAAAATAA GCGGAGAGCT GGCGCACCAG CGTGAAAGCT ACCAGCACTA TGACTACCCC GGGCGTTTTA AACAAGACCC AAGCGGCAAG GCCTTTACCG GCTACCGGCT GGATGCGTTA AGAGCGGGAG CGATGACCGG CTCCGGTGAA TCCAATGCCG CGATGTTGAT GCCCGGCAGC AGCTTTACCT TAACCGAACA CCCCAACCCG ACGCTGAATA GTGGCTGGCA GTTGGTTGCC ATCACCCACA GCGGGCAGCA GCCGCAGGCG CTGGAAGAAG AAAGCGGCGG TGAACCGACC ACCTACAGCA ACAGCTTCGA GGTTATCAGT GCCAAAAGCA CCTGGCGTGC CGACCTGCCG TACAAACCGA TGGTCGATGG CCCGCAAATC GCCACCGTGG TCGGCCCCGC CGGTGAGGAA ATCTACTGCG ATGAATATGG CCGTATCAAA CTGCAATTCC CGTGGGACAG GTATGGCTCC AGTGACGACC AGAGCTCCTG CTGGGTGCGG GTCAGTCAGG GCTGGGCCGG TGGTCAGTAT GGCCTGATAG CCATCCCGCG CATCGGCCAT GAGGTGATTG TCAGTTTTCT GGAAGGCGAC CCGGATCAGC CGATTGTCAC CGGCAGAACC TTTCATGCCA CCAACCCGGC ACCGTATCCG CTGCCCGCCA ACAAGACGCG CACCTCAATC CGCACATCAA CCCACAAAGG CGCGGGGTTC AACGAACTGC GCTTTGAAGA TCAGGCTGGG CAGGAAGAAG TGTTTATTCA TGCCCAGAAA GACATGAACA CCGTGGTGCT GAATAATCGC ACAACCAGCG TGACCGCTGA CCACACTGAA AGCGTCGGTG GCAATCAGGC GGTATCGGTG GTGAAAGACC AGTCCACTGA AATCCAGGGG CAGCAGAGTA TCGCCGTGAC CAAAAACCGC AACACGGTCG TGGATGACAA CGACAGCCTT CAGGTGAAAA ACAACATCGC TATCCAGTCG CAGAAGGGGG ACATCCTGAT AGCGACTGAC AAGGGGTTTA TTGGTATCGG CGCGGACGGG GTCATCAACA TCAAGGGTAC CCACATTGTC ATCAACGGCC AGCAAATCGA CCTGAACTGA
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Protein sequence | MANSTGLQFT VKVGALPAST FAVVDFQLSE ALNQPFALSL NLASALPDVD FGAVLDQPCE LMVWYEGVLQ RRVSGIISAF AQGDTGFRRT RYQAEVRPAL WRLGLRTNAR IFQAQKPEAI IGTLLEESGI TDYAFALRHD HAPREYCVQY RESDLAFVTR LAAEEGLYFF HEFEEGKHRV VFADDAGALS KGPELFFNLA TQGLSEGEYV RRFRYAEAVS TAEVALKDYS FKTPAYGLLH SKISGELAHQ RESYQHYDYP GRFKQDPSGK AFTGYRLDAL RAGAMTGSGE SNAAMLMPGS SFTLTEHPNP TLNSGWQLVA ITHSGQQPQA LEEESGGEPT TYSNSFEVIS AKSTWRADLP YKPMVDGPQI ATVVGPAGEE IYCDEYGRIK LQFPWDRYGS SDDQSSCWVR VSQGWAGGQY GLIAIPRIGH EVIVSFLEGD PDQPIVTGRT FHATNPAPYP LPANKTRTSI RTSTHKGAGF NELRFEDQAG QEEVFIHAQK DMNTVVLNNR TTSVTADHTE SVGGNQAVSV VKDQSTEIQG QQSIAVTKNR NTVVDDNDSL QVKNNIAIQS QKGDILIATD KGFIGIGADG VINIKGTHIV INGQQIDLN
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