Gene Pecwa_0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_0642 
Symbol 
ID8529007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand+ 
Start bp682066 
End bp682716 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content49% 
IMG OID 
ProductLytic transglycosylase catalytic 
Protein accessionYP_003258073 
Protein GI261819967 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAATC GCAGCATTTT AATCAGTATG CTCATCGTAC TTGGGATAAT GCATAGCGGT 
ATTGTTAGCG CACAAAAACG TCCTGTTGCC TTGCAACAAA TCCCAGCGGC ATACCGACAA 
ATTGCTAAAG ATGCGCGTGT GCCAGCTGAG TCACTTTATT CACTTGCACT AACGGAAAGC 
TCTCGTCGAT TGCCTTACGG TGAGCGGCCA TGGCCGTGGT CGATCAATGT TGCCGGAAAA 
ACGTATCGGT ATGAGACACG CGAATTGGCA TGGCAGGCGT TACGCCAGTT TATTCGCCAG 
ACACCGCTAA AGAACATTGA TGTTGGGATC GCTCAGGTTA ATTTGGGCTG GAACGGACAT 
CGTTTTCGCT CTTTTTATGA CGCATTTGAG CCGTTTACCA ATTTACGTGT TGCTGCCCGA 
ATCTTACGTG AGTGCTATGA CGCAAAACCT GATAGTTGGT TACGTGCCGC AGGGTGTTAT 
CACCGTCCTG CCGGCGGCCT GCCAACTGAA AGGTATATGG CGATTGTGCG CCAAAAGCTG 
AAGCTTATTT CTCCAGTTCA GGAACCATTA GAGTCATCAC CGCCCATCCT ACTTGCCTCT 
TCCGAAGCAA TTATTCCCAG CTACCAATTA ACATGGATAG AGCCAGAATG A
 
Protein sequence
MANRSILISM LIVLGIMHSG IVSAQKRPVA LQQIPAAYRQ IAKDARVPAE SLYSLALTES 
SRRLPYGERP WPWSINVAGK TYRYETRELA WQALRQFIRQ TPLKNIDVGI AQVNLGWNGH 
RFRSFYDAFE PFTNLRVAAR ILRECYDAKP DSWLRAAGCY HRPAGGLPTE RYMAIVRQKL 
KLISPVQEPL ESSPPILLAS SEAIIPSYQL TWIEPE