Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0624 |
Symbol | |
ID | 8528989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 666350 |
End bp | 666796 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | putative type IV pilus protein |
Protein accession | YP_003258055 |
Protein GI | 261819949 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAGGCA TGTTGGTGTT AATGGCGTTG TTAGTCCTGA TCGGCGGATA TCAGGGGGCA CGCTCTACTG GTGATTTGTC GGGGGATACG GCCATAGAAA CTTCTACGGC GCGCCAAATG CTTCAGACAG CCAACACGCT AGGTAGGTTA AAAGCTCAGG GGGGAAATGT CCTGTCTTTA TGTCCCGGGA ACCGACCTTC GAATCTGCTT TCGATCCCTG GTTTGGAAGA TAACCCAGAC ATTTACTGCA CCGAATATAA CGGACGGGTT TTCGTGTGGG CAAAAGAAAA ACCAGGTATG GCCAGGGTGT TACGTGAATT ATCACGCGAC TCACGGCTGC TGGCTCGTAT CAACGAAGGG CGTGTGAATA CTCTTGTTGA CCCTGCTCCC TGGCCAGTTC CATTGCCTGC CGGCATCACG GAAGGCTCTT TGGTATACAT CAACTAA
|
Protein sequence | MQGMLVLMAL LVLIGGYQGA RSTGDLSGDT AIETSTARQM LQTANTLGRL KAQGGNVLSL CPGNRPSNLL SIPGLEDNPD IYCTEYNGRV FVWAKEKPGM ARVLRELSRD SRLLARINEG RVNTLVDPAP WPVPLPAGIT EGSLVYIN
|
| |