Gene Pecwa_0618 details

Gene Information

• Locus tag: Pecwa_0618
• ID: 8528983
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 659898
• End bp: 661907
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 49%
• Product: DNA topoisomerase III
• Protein accession: YP_003258049
• Protein GI: 261819943

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGCCTCT TTATCTGTGA AAAACCCTCT CAGGCCAGAG ATATTGCTGC TGTTCTGGGA 
GCAACAAAGC GAGGACAAGG TTTCTTATCT GCTCCAGGAA TAACCATAAC CTGGGCCCGG 
GGGCACCTTT TAGAAACCGC CTCACCAGAA GTCTATGGCA CCCAGTTTGA GAAACCGTGG 
CGAATAGATG TGTTACCGGT TTTGCCCCCC GTATGGCAGA TGGTTGTGAA GTCAGAATCG 
TCAGACCAGT TCACGGTCAT CTCCCGATTG TTGAAGCAGG TTGATGAAGT CGTCATATCA 
ACTGATGCTG ATAGGGAAGG AGAAGTTATC GGATGGTCTC TGTTGGAATA TTGCGGATGG 
AGAGGTCCCG TTTTTCGTTT GTGGCTGTCT GCATTGGATG AGTCCAGTAT TCGTGCTGCA 
TTAGCTGCTA TTAAACCAGG TTCAGAAACA AAGCCGCTTT ATTATGCAGG CCTGGGGCGT 
TCGCGAGCGG ACTGGCTAAT AGGTATGAAC CTGACCCGGC TTTATACCGT GAAAGCGAGG 
GATAAGGGAT ATGACGGGCT TCTGTCTGTT GGGCGAGTGC AAACCCCTGT ATTGGCGATG 
GTCGTTAATC GTGAGCGAGA AATAGCGACG TTCGTCCCTA AACCTTACTG GCAAGTATGG 
GTAGCACTAC AGTCTAATGG TGTCCGTTTC TCTGCGCAGT GGGTTCCTGC GAAAATGTAT 
GTCGATGAAG AGAAACGCTG TATTCATCAG GACATCGCTC AGCAAGTTGC ACAGCTTTGT 
AAACAAACAG GCAAGGCAAC GGTAATTGAG CAGGAAACAA AGCGAGAAAA AGAGGCTGCA 
CCCTTGGCGT TCACCATGGG AACGCTACAG CAGGCCTGCG GCAGACTTTG GGACATGAGT 
CCTCAGAAAG TGCTGGACAT AGCACAGAGC CTGTATGAGA CGCATAAAGC AACGTCTTAC 
CCGCGAACCG ATTGTGGGTT TCTTCCTGAG TCAATGCGTG AGGAAATTCC TGATGTCCTG 
AGTGCATTGG TGAAAATCGA CCCCTCACTA CAGGCGTTGA TTTCTCAGCT AGATACTCGT 
TTTGTTTCCC GCATATGGGA TGACAAAAAA ATGACTGCCC ACCACGGTAT CATTCCGACA 
CGGCATGTTT GTGACATGTC GAAGATGAGC GATCAGGAAA AGCAGGTTTA CGTGTTAATC 
AGACGACATT ATCTAGCCCA GTTTTTTCCT CTGCATGAAG TCGATTTCAC GCGACTTTCC 
CTAAATATCG GAGGCCAACT GTTTCAGACA ACGGGGCGGG TCGTTGTTGT TCCTGGGTGG 
AAACGTTTGT TTAGTCAGGA TGACGGTGAA CATAAAGAGG CTGCGGCAGA TGAGAAAGAC 
CAATCTTTAC CTATGCTCGT AAAGGGAGAT AACTGTGGCG TGGCTGGCTC TGAGGTAAAG 
GCACTGAAAA CAAAGCCTCC CCAGTATTTT ACATTCCAAT CATTGATTGC GGCTATGATG 
AACGCTGCGG CGTATGTGAC CGATTTAACG CTGAAAAAAG TACTGAAAGA GAACGCAGGG 
TTAGGCACGG AAGCGACGCG TGGTGGGATT GTCGAAACGT TACTGGCGCG TAACTTCATC 
AGCATAAAAG GGCGTTACTT GCGTGCAACA GATATTGCGA TGGATCTTAT CGATGCTTTA 
CCTCACGCGT TAAAAGAGCC CGGTATGACG GCGCTTTGGG AACAGGCGCT CGATGAGGTT 
GCTAAAGGGA GAATGACGCT GGATAGCTTT ATGTCCCGAC AGACTCAGTG GATTTGTCAG 
TTGGTTTCCC TGGGAACTCA ACAAGATGTT GTCGTTCGTG TTCCTCCTAC GCCTGCTTGC 
CCTCTTTGTG GTAGTAAGAC GCGGTTACGA AAAGGGGCAA AAGGAGCATT TTATGGTTGT 
GAAAAATATC CAGACTGTAA GGGCATGATA AATGTCCCTG GCCAGAGCAA GAATGCGGCA 
TCTAAAACAC GAAAGAAAAA GCAGAATTAA 

 

Protein sequence

MRLFICEKPS QARDIAAVLG ATKRGQGFLS APGITITWAR GHLLETASPE VYGTQFEKPW 
RIDVLPVLPP VWQMVVKSES SDQFTVISRL LKQVDEVVIS TDADREGEVI GWSLLEYCGW 
RGPVFRLWLS ALDESSIRAA LAAIKPGSET KPLYYAGLGR SRADWLIGMN LTRLYTVKAR 
DKGYDGLLSV GRVQTPVLAM VVNREREIAT FVPKPYWQVW VALQSNGVRF SAQWVPAKMY 
VDEEKRCIHQ DIAQQVAQLC KQTGKATVIE QETKREKEAA PLAFTMGTLQ QACGRLWDMS 
PQKVLDIAQS LYETHKATSY PRTDCGFLPE SMREEIPDVL SALVKIDPSL QALISQLDTR 
FVSRIWDDKK MTAHHGIIPT RHVCDMSKMS DQEKQVYVLI RRHYLAQFFP LHEVDFTRLS 
LNIGGQLFQT TGRVVVVPGW KRLFSQDDGE HKEAAADEKD QSLPMLVKGD NCGVAGSEVK 
ALKTKPPQYF TFQSLIAAMM NAAAYVTDLT LKKVLKENAG LGTEATRGGI VETLLARNFI 
SIKGRYLRAT DIAMDLIDAL PHALKEPGMT ALWEQALDEV AKGRMTLDSF MSRQTQWICQ 
LVSLGTQQDV VVRVPPTPAC PLCGSKTRLR KGAKGAFYGC EKYPDCKGMI NVPGQSKNAA 
SKTRKKKQN