Gene Pecwa_0580 details

Gene Information

• Locus tag: Pecwa_0580
• ID: 8528945
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 625569
• End bp: 626285
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 53%
• Product: phosphonate C-P lyase system protein PhnL
• Protein accession: YP_003258015
• Protein GI: 261819909

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATACTC AATTGCGCAT CGAGAACGTT GATAAAACGT TCGTGTTATA TAACCAGCAG 
GGCACACAAC TACCGGTTTT CCACGATATC AGCCTGTCTG TGAAAGGGGG GGAATGTGTG 
GCGCTGCACG GGCATTCCGG GAGTGGGAAA TCCACGCTAC TACGTTCCCT GTACGGCAAC 
TATCAGCCCG ACGGCGGACA CATCTGGGTC CGTCATCGCG AACGTTGGGT CGATATCGTC 
AATGCGGACG CTCGCCATGT GCTGGAAATC CGCCGAGAAA CGGTGGGCTG GGTAAGCCAG 
TTCCTGCGTG TCATTCCACG TATTAGCACA TTGAACGTGG TCATCCAGCC TTTGTTGGAA 
CGCGGTATGT CGCGTCAGGA AAGTGAGATT CGTGCTGGCG AATTGCTGAC GCATCTGAAC 
GTCCCTGAGC GGCTTTGGTC GCTCGCACCC GCCACCTTTT CCGGTGGTGA GCAGCAGCGT 
ATCAATATTG CTCGCGGATT TATTGGCGAT TATCCGATTC TGCTGTTAGA CGAACCGACG 
GCCTCGCTGG ATGCCAAAAA TCGACTGGCC GTCACGCAAC TCATCGATGA TGCAAAAAGT 
AAAGGATGCG CTGTCGTTGG CATTTTTCAC GATGATGAAG TGCGCCAACA CGTCGCCGAT 
CGCCTTTACT CGATGACAAT GACTTCCCGC ACTCAGGAGA ACGTAAATGA TCATTAA 

 

Protein sequence

MDTQLRIENV DKTFVLYNQQ GTQLPVFHDI SLSVKGGECV ALHGHSGSGK STLLRSLYGN 
YQPDGGHIWV RHRERWVDIV NADARHVLEI RRETVGWVSQ FLRVIPRIST LNVVIQPLLE 
RGMSRQESEI RAGELLTHLN VPERLWSLAP ATFSGGEQQR INIARGFIGD YPILLLDEPT 
ASLDAKNRLA VTQLIDDAKS KGCAVVGIFH DDEVRQHVAD RLYSMTMTSR TQENVNDH