| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0569 |
|---|
| Symbol | |
|---|
| ID | 8528934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 614646 |
|---|
| End bp | 615449 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | secretion protein HlyD family protein |
|---|
| Protein accession | YP_003258004 |
|---|
| Protein GI | 261819898 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATAGTT TCAATAACTC AGCACTTCGT CGCGCTTTTA CGCCGCTGGC ATTTTGTCTA
TTGGCGTTTA GCGCTCATGC CCAAACGAGC GACCCACTCC TGGCAATGCC TTCTCATGAT
AATCAAACCG CTGCGCCCGC AGACAATCAG GCGCGTGGGA TCCTCATCGC CGTCGATCAG
GCCACGCTGT CCAGTGATTT GGCTGGGCGT ATTGTAGAAA TACCGTTTCG AGAAGGGGAA
TCCTTCAAGA AAGGCGATCT GTTAGTGCGG TTTGACTGTT CGATTTATCA GGCCCAATTG
GCCGCAGCCT CTGCTGCCAC GCGAGCTGCA GAAGCGGAAC TGAGCCAAAA TCAGCAACTG
GCACAGATGA AATCAGTAGG GAGACACGCG GTATCGTTAT CCGCAGCGCA CTTTGCACAG
GCTCAGGCAG AAAGCCAGGT CTATCAAATC CAGGTCAATC GTTGCCGACT TCTGGCCCCG
TTCGATGGAC AAGTAGTAAA ACGCCGCTCC CAAACATACG AAAGCGTCGG CATTGGCGCA
CCGGTTCTGG ATATCGTCAA TAATCGCCAT CTGGAGATCA ACCTGCTGGT GCCATCACGG
CTATTGTCGG TACTAAAACC CGGATTAACC TTTACCTTCA CTCCCGATGA AACCGGCAAA
CCGTTACAGG CCAAAGTCAC ACGGCTTGGC GCACGTATTG ATGAGAGCAG CCAAACCCTT
GGCCTGACGG GTACGCTGGC CCACACGGAC GATACGTTAA TGGCTGGGAT GAGCGGTACA
GCACAGTTCT CGGAGGCGCG GTGA
|
|---|
| Protein sequence | MNSFNNSALR RAFTPLAFCL LAFSAHAQTS DPLLAMPSHD NQTAAPADNQ ARGILIAVDQ
ATLSSDLAGR IVEIPFREGE SFKKGDLLVR FDCSIYQAQL AAASAATRAA EAELSQNQQL
AQMKSVGRHA VSLSAAHFAQ AQAESQVYQI QVNRCRLLAP FDGQVVKRRS QTYESVGIGA
PVLDIVNNRH LEINLLVPSR LLSVLKPGLT FTFTPDETGK PLQAKVTRLG ARIDESSQTL
GLTGTLAHTD DTLMAGMSGT AQFSEAR
|
|---|
| |