Gene Pecwa_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_0556 
Symbol 
ID8528921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp590825 
End bp592102 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content51% 
IMG OID 
Productnucleoside transporter 
Protein accessionYP_003257991 
Protein GI261819885 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTCG TTATGAGTCT CATCGGCATG CTTGTTCTGA TTTTTTTCGC GGTTATGTTG 
TCCAGTAATC GTAAAGCGAT CAGATTGCGC ACCGTAGTTG GTGCTTTCGT TATTCAGATT
AGTATCGGTG CGCTGGTGCT GTATGTGCCA GTAGGACGCA AGATTCTGGA AGGATTGACT
GGCGGTGTAG CAAACGTTAT CGCCTACGGA AATCAAGGTG TGTCGTTCAT TTTTGGCGGT
CTGGTTTCCG ACAAAATGTT CGAGGTTTTT GGCGGTGGCG GGTTCGTTTT CGCATTCCGT
GTATTGCCGA TTATCGTCTT TTTCTCTTCT CTGGTGGCAG TACTGTATTA CATTGGGGTG
ATGCAATGGG TTATTCGTTT ATTAGGCGGT GGGCTGCAAA AGCTGCTGGG AACCTCTCGT
ACTGAGTCGC TCTCTGCCAC TGCTAATGTC TTTGTGGGGC AGACAGAAGC CCCTCTGGTG
GTACGCCCGT ATATCGCCAA TATGACGCAA TCAGAGCTAT TTGCTGTCAT GTGTGGTGGG
CTGGCTTCTA TTGCGGGTTC TGTGATGGCG GGTTACGCGC AAATGGGCGT GCCGTTGGAC
TACCTGATTG CAGCATCCTT TATGGCGGCA CCGGGTGGAT TATTGTTTGC CAAACTGATG
GTGCCGGAAA CGGAAAAAAC GCACGATCAT GATGAAATGG CTGGCTTTGT TGATGAAGAC
GATCGCCCGG CTAACGTCAT CGATGCGGCA GCAAGCGGTG CGGCTTCCGG TATGCAGTTG
GCGCTGAATG TTGGTGCGAT GCTGCTGGCT TTTGTCGCTT TGATTGCGCT GCTTAATGGT
ATTTTGGGCG GTATCGGTGG TTGGTTTGAT TACCCGCAAC TGTCAATGGA ACTGATTTTG
GGTTGGTGTT TTGCGCCCGT TGCGTTTCTG CTCGGTATTC CCTGGAGTGA AGCAACCGTT
GCTGGTTCGT TCATTGGGCA AAAACTGATC GTCAACGAGT TCGTCGCTTA CATGAATTTC
AGCGAATATC TGAAAGCCGA TGACGTCGTG CAGGCCGCTG GCTTGCAGGT TCTGTCGGAT
CATACCAAAG CGGTGATTTC GTTCGCACTG TGCGGCTTTG CTAACCTTTC GTCTATTGCT
ATTCTTATTG GAGGTTTGGG CAGTATGGCA CCGACTCGGC GTCAGGATAT TGCCCGCTTT
GGTTTGAAAG CGGTTGCGGC AGGTACGCTT TCTAACCTGA TGAGCGCCTG CATCGCAGGG
TTCTTTTTGG CTCTGTAA
 
Protein sequence
MQLVMSLIGM LVLIFFAVML SSNRKAIRLR TVVGAFVIQI SIGALVLYVP VGRKILEGLT 
GGVANVIAYG NQGVSFIFGG LVSDKMFEVF GGGGFVFAFR VLPIIVFFSS LVAVLYYIGV
MQWVIRLLGG GLQKLLGTSR TESLSATANV FVGQTEAPLV VRPYIANMTQ SELFAVMCGG
LASIAGSVMA GYAQMGVPLD YLIAASFMAA PGGLLFAKLM VPETEKTHDH DEMAGFVDED
DRPANVIDAA ASGAASGMQL ALNVGAMLLA FVALIALLNG ILGGIGGWFD YPQLSMELIL
GWCFAPVAFL LGIPWSEATV AGSFIGQKLI VNEFVAYMNF SEYLKADDVV QAAGLQVLSD
HTKAVISFAL CGFANLSSIA ILIGGLGSMA PTRRQDIARF GLKAVAAGTL SNLMSACIAG
FFLAL