Gene Pecwa_0552 details

Gene Information

• Locus tag: Pecwa_0552
• ID: 8528917
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 588274
• End bp: 588882
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 48%
• Product: periplasmic protein
• Protein accession: YP_003257987
• Protein GI: 261819881

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.783524
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA CCACATTGAC ACAATCGCTG ATCGTCGTTG CCCTAGGTTC AATTCTGGCT 
GGCGGTGCTA TGGCTGAAGA AACGTTAGGG CAGAAGGTAG ATCGTATCGC GGATACAACG 
GGTGCAAAAA TCGATAGTTC CGCGAATAAA GCGTCTGGTT ACATGAACGA CAGCGCTATT 
ACGGCAAAAG TGAAGAGTGC ATTGCTGGAA GACAAATCGA TTACTAGCAG CGATATTTCA 
GTTGAAACGT CAAACGGTGT CGTCACGTTG AGCGGCTTTG TCGGCAGCCA GGCTCTCAGC 
ACCCGAGCAG TGGAAATTAC CACTCAGATT GATGGCGTCC AATCCGTTAG CGACAAACTG 
CAGGTTAAGG ATAATCCATC ACAATCGGTT GGTGCTTACG CTGATGATGC CGTGGTGACG 
AGCACGATTA AGGCTAAACT GTTGGCGGAT GACATTGTTC CGTCTCGTAA AGTGAAAGTC 
GAAACTCAGG AAGGCGTTGT GCTACTGAGC GGTGAAGTGG ACAACAAAGC GCAGTCCGAT 
CGTGCTGAAA GTATTGCAAA AGCCGTTGAG GGCGTGAAAA GCGTCAAAAA CGACCTGACA 
GTCAAATAA 

 

Protein sequence

MKKTTLTQSL IVVALGSILA GGAMAEETLG QKVDRIADTT GAKIDSSANK ASGYMNDSAI 
TAKVKSALLE DKSITSSDIS VETSNGVVTL SGFVGSQALS TRAVEITTQI DGVQSVSDKL 
QVKDNPSQSV GAYADDAVVT STIKAKLLAD DIVPSRKVKV ETQEGVVLLS GEVDNKAQSD 
RAESIAKAVE GVKSVKNDLT VK