Gene Pecwa_0548 details

Gene Information

• Locus tag: Pecwa_0548
• ID: 8528913
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 583458
• End bp: 584156
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 53%
• Product: hypothetical protein
• Protein accession: YP_003257983
• Protein GI: 261819877

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTCGCG CCCGGGTAAA ATTTCGTCTA CACCGCACGG CAATTGTGCT GATTTGCCTC 
GCCCTGCTGG TGGTATTAAT GCAAGGTGCG TCCTATTTCA GTTTAAGCCA CCAGATGGCG 
CGCTCTGAAC AGGTCGAAGA TCTGTCGCGC ACGCTGTCCA GACAGGTGGC TTACAGCCTT 
TCGCCGCTGA TGAGCAGCGT GGATGATAAT GGTCAAAAGA TTACGACCAT CCTCAAACAG 
CTCACCGATC ATAGCCGTAT TCTGGATGCT GGTGTGTATC AGCAGGATGG TTCGCTGGTG 
GCGCATGTGG GTGAACAGGT ACAACTGCGA GACCGGTTGG CGCTGGACGG CAATCGGGTC 
GGCAGTTACT TTAACCATCA ACTGGTGCAG CCCATTGAGG GAAAAGAAGG GCCTATCGGC 
TTCCTGCGCA TCACGCTGGA TACGCATGTG TTGGCAACCG AAGCCAGGCA GGTGGATAAC 
ACCACCAATA TTCTTCGTCT GATGATCTTA CTGTCGCTGG CTATCGGCAT CATTCTGACC 
CGAACGCTGT TGCAGAATCG TCGTACTCGC TGGCAACAGT CTCCTTACCT TCTTACTGCG 
AGCACGCCAG TGAAAGAAGA AGAGGAAGAG GCAGAGAGCG ACACGCAGCC AACTGGCAGC 
GTGGTAGTAA AAAAAGACGG AGAAGAGAAG AGCCTCTAA 

 

Protein sequence

MVRARVKFRL HRTAIVLICL ALLVVLMQGA SYFSLSHQMA RSEQVEDLSR TLSRQVAYSL 
SPLMSSVDDN GQKITTILKQ LTDHSRILDA GVYQQDGSLV AHVGEQVQLR DRLALDGNRV 
GSYFNHQLVQ PIEGKEGPIG FLRITLDTHV LATEARQVDN TTNILRLMIL LSLAIGIILT 
RTLLQNRRTR WQQSPYLLTA STPVKEEEEE AESDTQPTGS VVVKKDGEEK SL