| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0511 |
|---|
| Symbol | |
|---|
| ID | 8528875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 557251 |
|---|
| End bp | 558285 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | rhamnose-proton symporter |
|---|
| Protein accession | YP_003257954 |
|---|
| Protein GI | 261819848 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATC CTATTCTTCT TGGTATTTTC TGGCACTTCA TCGGCGCGGC CAGCGCGGCC
TGCTTCTACG CACCGTTTAA GCAGGTCAAA AACTGGTCGT GGGAAACCAT GTGGTCACTC
GGCGGATTTT TCTCGTGGAT TATCCTGCCC TGGAGCATCA GTTGGTGGCT ACTTCCTGAT
TTTTGGCGTT ATTACGCTTC GTTCGATATT GCAACCCTGC TGCCGATCTT CCTCTTCGGT
GCCATGTGGG GGATCGGCAA TATCAACTAC GGGCTGACGA TGCGCTATCT TGGCATGTCG
ATGGGCATCG GTATCGCTAT CGGCGTGACG CTGATTATCG GCACGCTGAT GACGCCCGTT
CTGCAAGGTA AATTCTCGGT TCTGTTTGGC TCGGCAGGTG GCCAAATGAC ACTACTGGGC
GTGCTGATTG CAGTCATCGG CGTCGCGATT GTCAGCTACG CGGGTTTGTT GAAAGAACGT
GCACTCGGCA TTCGTGCCGA AGAATTCAAC CTGAAAAAAG GGCTGATTCT GGCCGTCCTG
TGCGGGATCT TCTCCGCAGG CATGTCCTTT GCGATGGATG CCGCCAAACC GATGCATACC
GCCGCACAGG CGCTAGGAAT CAACGCGCTG TACGTCGCCC TCCCCAGCTA TGTGGTGATC
ATGGGGGGCG GTGCCATCGT AAATCTGGGC TTCTGTTTCA TCCGTTTGGC TACGTGCAAG
GGAATCTCAT TGAAAGCCGA TCTGGCGCAG GCTAAACCTT TACTGATCGC CAATGCGCTC
TTCGCCATTC TGGGCGGTGT CATGTGGTAT TTGCAGTTTT TCTTCTATGC CTGGGGGCAC
GCCAACATCC CGGCAGACTA CACCTATATC AGTTGGATGC TGCACATGAG CTTCTACGTG
CTGTGCGGTG GCATCGTCGG CTTGCTGTTT AAGGAGTGGA AAGCCGTGGG GCAGAAGCCC
GTGCGCATGC TGGTTCTGGG CTGCATGGTA ATTATTCTGG CGGCGAATAT TGTTGGATTA
GGCATGGCCG TGTAA
|
|---|
| Protein sequence | MSNPILLGIF WHFIGAASAA CFYAPFKQVK NWSWETMWSL GGFFSWIILP WSISWWLLPD
FWRYYASFDI ATLLPIFLFG AMWGIGNINY GLTMRYLGMS MGIGIAIGVT LIIGTLMTPV
LQGKFSVLFG SAGGQMTLLG VLIAVIGVAI VSYAGLLKER ALGIRAEEFN LKKGLILAVL
CGIFSAGMSF AMDAAKPMHT AAQALGINAL YVALPSYVVI MGGGAIVNLG FCFIRLATCK
GISLKADLAQ AKPLLIANAL FAILGGVMWY LQFFFYAWGH ANIPADYTYI SWMLHMSFYV
LCGGIVGLLF KEWKAVGQKP VRMLVLGCMV IILAANIVGL GMAV
|
|---|
| |