Gene Pecwa_0508 details

Gene Information

• Locus tag: Pecwa_0508
• ID: 8528872
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 555341
• End bp: 555955
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 44%
• Product: protein of unknown function DUF1440
• Protein accession: YP_003257952
• Protein GI: 261819846

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTTTT TCGAACAAAC CCCTCCGTCC CGCAGACGTT ATGGGTTAGC TGCTTTTATT 
GGTTTGATTG CGGGTATTGT TTCTTCTTTT GTAAAGTGGG GCGCAGAAAA TCCGCTTCCT 
CCACGTAGCC CTACGGATAT ATTTAGTGGT GCTTGTGCAC CTGAATCATT GATTAGAGCT 
GCTGAGCAAA TTGATTGTTC TCGTAATTTC CTCAACCCTC CCTACATTTT TTTACGCGAT 
TGGCTTGGGG TCGTTGACCC TAATGCGGCT GTTTATACCT TTGCCGGCCA CGTATTCAAT 
TGGGTTGGTG TGACGCATAT TATTTTCTCT ATTGTTTTCG CTTTAGGTTA CTGTGTTGTT 
GCTGAGGTAT TTCCTAAAAT AAAATTATGG CAAGGTTTAT TGGCTGGTGC GCTGGCTCAA 
TTGTTTGTCC ATATGATTTC ATTCCCATTG ATGGGGCTGA CGCCTTCTCT ATTTGTTCTC 
CCTTGGTATG AACATGTATC AGAAATCGTG GGTCATCTCA TTTGGTTCTG GTCTATTGAG 
ATTATTCGTC GTGATTTGCG TAATCGTATG ACTCACGAAC CTGACCCAGA GATTCCTTTG 
GGCGCGTCAC GATAA 

 

Protein sequence

MNFFEQTPPS RRRYGLAAFI GLIAGIVSSF VKWGAENPLP PRSPTDIFSG ACAPESLIRA 
AEQIDCSRNF LNPPYIFLRD WLGVVDPNAA VYTFAGHVFN WVGVTHIIFS IVFALGYCVV 
AEVFPKIKLW QGLLAGALAQ LFVHMISFPL MGLTPSLFVL PWYEHVSEIV GHLIWFWSIE 
IIRRDLRNRM THEPDPEIPL GASR