| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0487 |
|---|
| Symbol | |
|---|
| ID | 8528851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 529631 |
|---|
| End bp | 530866 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function UPF0027 |
|---|
| Protein accession | YP_003257931 |
|---|
| Protein GI | 261819825 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAGA TGAAAACGCA GGATTACGAC ATGATGTCGC CAGTGAATAG CGCACCGGTA
AAAATGTGGA CACAGGGTGT CCCTGTGGAG CCGGAAGCCC GCGATCAACT GCTGAATACG
GCCAAAATGC CGTTCATTTT TAAACATCTG GCGGTGATGC CGGATGTGCA TCTGGGAAAA
GGATCGACGA TCGGTAGCGT GATCCCCACG CGTGGCGCGA TTATTCCCGC TGCGGTCGGC
GTAGATATCG GCTGTGGAAT GATCGCGGTG CGCACATCAC TGGTTGCCAG TGACTTGCCG
GATAACCTGC TGGGGCTACG TAGCGCGATT GAACAGGCGG TGCCGCACGG ACGTAGCGTT
ACGCGTTCCA AGCGCGACGT CGGTTCCTGG CAGAATCCAC CGCAAACGGT GGATTCGCAT
TGGTCACTGC TGGAACCACG TTTTAAACGT TTGACGGATA AATATCCGCA GTTGCTGAAA
ACCAACAACT ATCAGCATCT GGGAACGTTA GGGACGGGTA ACCACTTTAT CGAAATCTGT
CTGGATGAGG TGGATCGCGT GTGGGTGATG TTGCACAGCG GATCGCGTGG TGTAGGAAAC
GCGATTGGAT CGCTGTTCAT CAAGCTGGCG CAGGAAGATA TGCAGCAGCA CATTGCAAAT
CTGCCTGACC GTAATCTGGC GTATTTCGAG GAAGGAAGCC TGCACTTTGA GGATTACATG
GAAGCGGTCG AGTGGGCGCA GGATTTTGCT CGTCATAACC GTGAAGTGAT GATGTCGCAT
ACGTTGGCGG CACTGTCCCG TATTGTGACG AAGCCGTTTA CCACTCAGCA GGAAGGCGTG
AACTGCCACC ATAACTACGT GCAGCGCGAA ACGCACTTTG GTGAATCGGT GCTGATCACC
CGTAAAGGGG CGGTATCGGC GCAGAAAGGT CAAATGGGGA TCATTCCGGG ATCGATGGGG
GCGAAGAGCT TCATCGTGCG CGGATTGGGG AACGAAGACA GTTTCTGTTC CTGTAGCCAC
GGTGCGGGAA GAACTATGAG CCGTACCGCA GCGAAAAAAC GTTTTACCGT GGAAGATCAG
ATTCGCGCGA CCGCGCACGT TGAGTGCAGA AAAGACAGCA ACGTTATCGA CGAAATCCCG
ATGGCGTACA AAGATATCGA TAAGGTGATG GCGGCACAGT CATCGCTGGT GGAAATCGTG
CATACGCTGC GTCAGGTGGT GTGTGTAAAA GGATAA
|
|---|
| Protein sequence | MEEMKTQDYD MMSPVNSAPV KMWTQGVPVE PEARDQLLNT AKMPFIFKHL AVMPDVHLGK
GSTIGSVIPT RGAIIPAAVG VDIGCGMIAV RTSLVASDLP DNLLGLRSAI EQAVPHGRSV
TRSKRDVGSW QNPPQTVDSH WSLLEPRFKR LTDKYPQLLK TNNYQHLGTL GTGNHFIEIC
LDEVDRVWVM LHSGSRGVGN AIGSLFIKLA QEDMQQHIAN LPDRNLAYFE EGSLHFEDYM
EAVEWAQDFA RHNREVMMSH TLAALSRIVT KPFTTQQEGV NCHHNYVQRE THFGESVLIT
RKGAVSAQKG QMGIIPGSMG AKSFIVRGLG NEDSFCSCSH GAGRTMSRTA AKKRFTVEDQ
IRATAHVECR KDSNVIDEIP MAYKDIDKVM AAQSSLVEIV HTLRQVVCVK G
|
|---|
| |