| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0486 |
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| Symbol | |
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| ID | 8528850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 527862 |
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| End bp | 529439 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | |
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| Product | Sigma 54 interacting domain protein |
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| Protein accession | YP_003257930 |
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| Protein GI | 261819824 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTC GCGTCGTCAT TGGTGTGCTG GGCACCACGC TGGATAGACG GGGTAAACGG
GAGAATCGCT GGACGAAATG GCGGCCTACT GTCGGCCTGT GTCAGCAGCC GGATTTTCCG
GTCGATCGTC TGGAACTGCT GCATCAATCG CGCAACGAGG GAATGGCACA GCAGGTGGCA
GAGGATGTTG CCGTGGTGTC ACCCGCCACG CAGGTCACGC TTCAGACTGT TGAGTTAAAC
GATCCCTGGA ATCTGGAAGA GGTCTACAGC GCCTTTCTGG ACTTTGCGAG CCGCTACCCG
TTCGACACTG AGAACGAAGA GTATTTCGTT CACATCACCA CCGGTACCCA CGTCGTACAG
ATTTGCTGGT TCCTGCTGAC TGAAGCCCGC TATCTGCCCG CCAAGCTGCT GCAAACCGCA
CCGGGGGAGA AAGCGGATCG CCCTGCACCA CAGGGCATCT ATGCCGTCAT CGATCTGGAT
CTCAGCCGCT ACGCCACCCT CACTAGCCGT TTCCAACACG AGCAGCAGCG CTCCGTCTCG
TTCCTGAAAT CCGGCATCGA AACACGCAAT AGCACATTCA ATACGTTGAT CGACCAGATT
GAACGCGTCG CGCTGCGATC CACCGCGCCG ATGCTCTTAA CCGGCCCGAC CGGTGCGGGG
AAATCCTTTC TGGCACAGCG TATCTATCAG CTACGCCAGT CCCGCCATCT AGTCAGTGGC
CACTTTGTCG CGGTTAACTG CGCTACGCTG CGCGGTGACA ATGCGATGTC AACGCTGTTC
GGTCATGTGA AAGGCGCATT TACTGGCGCA TTGCAGGCAA GAAGCGGGCT GCTACGTGAA
GCGGACGGCG GCATGCTGTT TCTGGATGAA ATCGCCGAAC TGGGGCTGGA TGAACAGGCC
ATGCTGCTCA AGGCCATTGA GGAAAAACGC TTTTTCCCGT TTGGCTCAGA TAAAGAAGTC
AGCAGCGATT TTCAGTTAAT TGCTGGCACG CACCGCAACC TGCGCGAGTG GATCGCACAG
GGCAAATTTC GTGAAGATCT CTATGCGCGT ATTAATATGT GGACCTTCCC CTTGCCGGGA
CTGGCGGAGC GGCGGGAAGA CATCGAACCC AACATTGAAT ACGAGCTCCA GCGCTTCACA
CGCGATCATC AAACACAGAT TCGCTTCGAT AAAGAGGCAC GACAGCGCTA CCTCGCCTTT
GCCTGCTCGC CGCAGGCAGC GTGGCATGGC AACTTCCGCG AACTCGGCTC TTCTATCGCC
CGCATGGCGA CACTGGCAGA ACAAGGCCGC ATCACCGTTG CTCTGGTAGA AGAAGAAATT
ACTCGCCTGC AAGCCAGTTG GCGGGGTGAT GCGCCAGCAA CCGCGCTACC GCCCGAACTC
GCCAACATCG ACCTGTTTGA ACAGCGCCAG CTTGAAACCG TGCTCGACGT CTGCCGCACC
GCCAATTCGC TCTCCGAAGC CGGTCGCCTG CTGTTCGCCG TCTCACGCCA GCAAAAACAA
AAGCCCAACG ACGCCGACCG ACTGCGTAAG TATCTGGCAC GTTTTGGGCT GAGCTGGGAG
GGGTTGAAGC GGGTATAA
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| Protein sequence | MKRRVVIGVL GTTLDRRGKR ENRWTKWRPT VGLCQQPDFP VDRLELLHQS RNEGMAQQVA
EDVAVVSPAT QVTLQTVELN DPWNLEEVYS AFLDFASRYP FDTENEEYFV HITTGTHVVQ
ICWFLLTEAR YLPAKLLQTA PGEKADRPAP QGIYAVIDLD LSRYATLTSR FQHEQQRSVS
FLKSGIETRN STFNTLIDQI ERVALRSTAP MLLTGPTGAG KSFLAQRIYQ LRQSRHLVSG
HFVAVNCATL RGDNAMSTLF GHVKGAFTGA LQARSGLLRE ADGGMLFLDE IAELGLDEQA
MLLKAIEEKR FFPFGSDKEV SSDFQLIAGT HRNLREWIAQ GKFREDLYAR INMWTFPLPG
LAERREDIEP NIEYELQRFT RDHQTQIRFD KEARQRYLAF ACSPQAAWHG NFRELGSSIA
RMATLAEQGR ITVALVEEEI TRLQASWRGD APATALPPEL ANIDLFEQRQ LETVLDVCRT
ANSLSEAGRL LFAVSRQQKQ KPNDADRLRK YLARFGLSWE GLKRV
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