| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0478 |
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| Symbol | |
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| ID | 8528842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 518281 |
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| End bp | 519696 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003257922 |
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| Protein GI | 261819816 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGAA TAACACACGG TAAAACTCGG CTTCTGGCCT ATTTCCCCAT AGCACTACTG
CTATGCTGGT CGTCCACGGC TTTCGGACAA GCCATCTCAT TTAGTCAGGC CTGGGTTCGT
CTTCTGCAAA GCGATGACAG CATTGCCGCC GAACATGCAG GAGTCGATCG CGCTCAGTCC
TTACAAGAAT CCGCCAAAGG CCTCTATTGG CCACAGGTCA ACGTAGGTGC CAGCTATACG
CGCCTTGATA AGCCTGTCGA ACTGGATGCG CGTGACCTTA ATCCGCTGGC AAATCATCGG
GACATCTTCG CCGCACTAAA CCAGCTTGTT AACATCAGCG GCAATCCCTT CGTCACCCGC
TTCACAGAAC AAAACGTGGT CACCAGTTCC GTTCAGGTCG TCTGGCCGTT ATTCACTGGA
GGCCGGATTG ATGCCGCGCA GTCGATCCGT GCCGCACAGG TCAACGAGGC AGAACAGATG
CTGATTGTCC GCACGCTGGC GCAGTTTGAG GCACTGGCAC AGACCTACTA CGGCGTGGTG
ATGGCACATC AGGTAATGAA GACGCGTCAG GATATAGAGA AAGGCATGGC GCAGCATTAT
GACCACGCTC GCAAGTTAGA AGCTCAGGGA CAAATAGCCA GAGTCGAAGT ACTGTCCGCA
CAATCCGCTT ATGACATGGC GCGTATAGAA ACACAAAAAG CACGGCGAAG TATGGAAACC
ACGGAAATGG TGTTCGCCAA ACTCATCAAG ACAGAAGGCG CAACGCCCTC CTCTTCGCTG
TTCGTCAACA AAACGCTTCC CGAACTGCCG GCGTTGGTGA AACAAACGCT CAATACGCAC
CCCGGCTTAA AGGTGCTCTC CGCCAAGCGC GATCAGGCCA AGGATCTCAT CCGTATTGAG
CGCGCCAAAT ACGCTCCTGA CGTATTTCTA TTCGGCAACT ATCAACTCTA TGAGCAGGAC
ACGCTGGCAG CCAGAACGAC GCCAGATTGG ATGGTAGGCG TCGGCGTATC CGTCCCGCTC
ATCAGCCGTG AAGGCCGTTC TGATAATATC GCCGCCGCGA AAAGCGCAGA AATGCAGGTT
AACCATCTGG AAGCAGATAT GCGGCAAAAC CTTGAGATCG CGGTCGAAAG CACGTGGCGA
GAAGCTAGGT TAGCGTTGGA AGAGTTCAAT TCCCTGTCTT CGACGGAAAA ACTGGCAGAA
GAGAACGTTC AATTACGCAA CAAGGCGTTT ATGCAAGGCA TGTCTACTTC GCTGGACGTT
GTAGATGCGT TGAATCAGTT GGCCGGAGCC AAAACACAGC GCGCCTCCGC AGCCTATCGT
TACGTGGTTT CCATCGCCAG GCTGATGGCT ATTTCCAGCC AGATAAACCG TTTCTCTGAC
TACCAGACCC AATACGCTAT ACAGGTGATG CCATGA
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| Protein sequence | MARITHGKTR LLAYFPIALL LCWSSTAFGQ AISFSQAWVR LLQSDDSIAA EHAGVDRAQS
LQESAKGLYW PQVNVGASYT RLDKPVELDA RDLNPLANHR DIFAALNQLV NISGNPFVTR
FTEQNVVTSS VQVVWPLFTG GRIDAAQSIR AAQVNEAEQM LIVRTLAQFE ALAQTYYGVV
MAHQVMKTRQ DIEKGMAQHY DHARKLEAQG QIARVEVLSA QSAYDMARIE TQKARRSMET
TEMVFAKLIK TEGATPSSSL FVNKTLPELP ALVKQTLNTH PGLKVLSAKR DQAKDLIRIE
RAKYAPDVFL FGNYQLYEQD TLAARTTPDW MVGVGVSVPL ISREGRSDNI AAAKSAEMQV
NHLEADMRQN LEIAVESTWR EARLALEEFN SLSSTEKLAE ENVQLRNKAF MQGMSTSLDV
VDALNQLAGA KTQRASAAYR YVVSIARLMA ISSQINRFSD YQTQYAIQVM P
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