Gene Pecwa_0467 details

Gene Information

• Locus tag: Pecwa_0467
• ID: 8528831
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 500385
• End bp: 502364
• Gene Length: 1980 bp
• Protein Length: 659 aa
• Translation table: 11
• GC content: 51%
• Product: von Willebrand factor type A
• Protein accession: YP_003257911
• Protein GI: 261819805

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTACG CTCACTGGTT CAGTGGCCTA TTTTGCGCCG CCGCCTTTAG CTTCCCGGCA 
CTCTCAGCCG ATCAAAAACC GCTCCTTCAG GAAGGAAAAC ACACGCTGTA CCAGCGCGTG 
CTGACTTATC CGGGCTGTGA GTTGGCAAGT AACATGGGTG ACTCAGGTAA AGAACAGCCT 
GCGTTTAGCC GTTTCTACGT GTATCAACGC AGCCAGCACG GGCAAGATGA ATGGCTACAA 
GTAGGGCCAG ATAGCCTGGG CCGTGTTGCC GGTTGGATGA AATCGTCTTG TACCGTGGAC 
TGGAAAATGC AACTGACGCT GGCGTTTACC AACCCGGCAG GCCGCAACCC GATGCTGTTC 
TTCCGTGATA AGAGTGACGT TGAATCCATT CTCAATAGTA AAAAACCCTC TGCAATGCTG 
GATCCACTTC TGACTCGTTT GAAGAATAAA CAGCCCGTAC CGCAAGTACT GGCGAGAGAG 
CCAGATTACA TGGTTGATCA GCTTAAAAAT TTCTATCTTC TGCCGGTACT TGGATCAGAC 
GATATTTTCA CCGACACCGG CTTTCAGGTT CGCGTTCTGA ATGTTGCATC GGTTAGTGAA 
AAAATCAATG CCACAGCAGG AGCAGGAGGT TCGACTTCGG ACGAACAAAC CGGGCAGAAC 
GAAAAAAATA TGATGAAAGG CTTCTCCGCA TCAGTGGTGT TCGTGATCGA TTCCACCATT 
TCCATGGGGC CTTACATTGA ACGAACCAAA GAAGCTATCG ATAAGATTTA TCAGCGCATT 
GAGAAAGAGC AGCTACAGGA TAAGGTGAAG TTTGGTTTGG TCGCGTACCG TTCCAGCGTC 
AAAGTTGTGC CAGGTCTGGA ATACGACAGC AAGATGTATG TTGATCCCAA CACGGTGAAA 
AGCGGTAAAG ATTTTCTCGC CAAAGTGCAC GATCTTAAAC AAGCCACGGT ATCAAGCAGC 
AAAATGGACG AGGATGCCTA CGGTGGCGTA ATGATGGCGC TGGATAAAGT CGACTGGACC 
CAGTTTGGTG CCCGTTATGT CGTACTCATT ACCGATGCCG GAGCACTGGA GGGATCTGAC 
AGCCTATCCT CAACGTCGCT AGATGCAGCC CAGGTGCGCC AGGAAGCGGC TTACCGTGGC 
GTGGCACTTT ACGCCATGCA CCTCAAGGCC CCAAATGGAA AGAAAAACCA CGCCTCGGCG 
GAAGCTCAGT ATCAGGATCT GACGCTGAAC CCCTTTCTGC ATAAACCCCT GTACTACCCG 
ATCGATTCTG GAGACGTGAA CAACTTTGGC AAAATGGTCG ATGGGCTGGC TAACGCCATT 
ACCGGGCAGA TAAAAGCAGC CTGGAGTGGC GAGAATACAG TGGGCAGTGC GCTCGGTGCC 
AGCCCAGAAT ATGCCGGTAA ACAAACTAAC CCATTATTAA GCGATGCCGA GAAATTGAGT 
AACGCGATGC GCCTTGCCTA TCTTGGCGAA AAGCAGGGTA CACAGGCGCC GCCAGTGTTT 
AAGTCATGGA TTAGCGACCG CGATCTGGTG AAGCAAAATA TTCCAGCAAC AGAAGTCCGG 
GTGCTGCTCA CCAAGAGCGA ACTGAGCGAT TTAAGCGATG TGATGAAAAA AATCATCAAC 
GCGGCTAATG AAGGGATGAT TTCACCGGAT GACATGTTTG CCAGTCTGCG TTCACTCGCT 
GCAACGATGG GGAATGATCC GAACCAGGCA AAAAGCAAGA GTGCCACCCG TCTTGGTGAG 
ATGGGGCTTC TGGGAGAATA CATCGACAGC CTCCCCTATC TCAGTGAGGT ATTAAGTCTG 
GATGAAGAAA CCTGGAAAAG CTGGGATGGC TTGGAACAGG AACGGTTTAT TCGTCGCCTG 
AACACCAAGC TCAGCTACTA TCAGCGTTAC AATCAGGATG TTGATCGTTG GATCGCTTTA 
GCACCAGACA GCGACCCTCG GGATAACGTC TACCCGGTTC CTCTAGAAAA TTTACCCTAA 

 

Protein sequence

MNYAHWFSGL FCAAAFSFPA LSADQKPLLQ EGKHTLYQRV LTYPGCELAS NMGDSGKEQP 
AFSRFYVYQR SQHGQDEWLQ VGPDSLGRVA GWMKSSCTVD WKMQLTLAFT NPAGRNPMLF 
FRDKSDVESI LNSKKPSAML DPLLTRLKNK QPVPQVLARE PDYMVDQLKN FYLLPVLGSD 
DIFTDTGFQV RVLNVASVSE KINATAGAGG STSDEQTGQN EKNMMKGFSA SVVFVIDSTI 
SMGPYIERTK EAIDKIYQRI EKEQLQDKVK FGLVAYRSSV KVVPGLEYDS KMYVDPNTVK 
SGKDFLAKVH DLKQATVSSS KMDEDAYGGV MMALDKVDWT QFGARYVVLI TDAGALEGSD 
SLSSTSLDAA QVRQEAAYRG VALYAMHLKA PNGKKNHASA EAQYQDLTLN PFLHKPLYYP 
IDSGDVNNFG KMVDGLANAI TGQIKAAWSG ENTVGSALGA SPEYAGKQTN PLLSDAEKLS 
NAMRLAYLGE KQGTQAPPVF KSWISDRDLV KQNIPATEVR VLLTKSELSD LSDVMKKIIN 
AANEGMISPD DMFASLRSLA ATMGNDPNQA KSKSATRLGE MGLLGEYIDS LPYLSEVLSL 
DEETWKSWDG LEQERFIRRL NTKLSYYQRY NQDVDRWIAL APDSDPRDNV YPVPLENLP