Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0465 |
Symbol | |
ID | 8528829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 498486 |
End bp | 499718 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | protein of unknown function DUF214 |
Protein accession | YP_003257909 |
Protein GI | 261819803 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTCTTCCT CCCTGCCTGA ACTTCAACCA AAACATACAC TTCTGCTACG TATGGCGCTG CGCGATTTAT TGCACGATCG CAAAGTCACG CTGTGTATTG TTTTTTCTCT GATTGCGGTA ATCGCACCGC TATTATTGCT GTTTGGCCTG AAGAACGGCA TCGTCAGCCA ACTACGCCAC GACCTGCTGG ACGATCCGCG CACGCGGGAA GTGCGTATGA CGGGTAATGG CAACTATGAC CTCACCTGGC TGGAGCAGTT GGCACAGCGC CCGGAAGTCG GTTTCACGAT CCCTCTCACC CGATCGTTGA ATACACAGGC GGATTTGGTA CGAGACAGCC AGCATTTTGC CGCGAATGCT GAGGTCATCC CCACCGGAGC AGGTGACCCA TTACTTCAGG GCATTCCTCC GCTACAGCAA GACACGCAGG TTGTATTAAG CGCCAGTGCG GCACGCCGTC TTGATGTCCA AACCGGGGAT AGCTTCCATC TGCGGATCAA CCGCAATCTT GAGGGGCAGA ACCAGCGCGC AACGCTTGAG CTATCCGTCA GTGGGATACT TGATGAAGCC AAATTCTCTC GTCCCGCCGC GTTTATTTCC CTGCCGCTTC TGGTCGCACT GGAAGATTAC CGTGATGGTT TTCAGGTGTC GTTACTCGGG GTTAGCGAAG GGGAACCGTC ACGGCCGCGT ATGCGCTTTG CCCGAGCACG ACTTTATGCC AGTACGCTAG ATGATGTCGC GCCACTGGCC AGTTGGCTGG AAGCACAGCA TATAGAATCA GTCACTCAGG CGGCGCAGAT AGAATCTGTG CGTGCCATTG ATCGCGTGCT GGGTCTCATC TTTGCGGTCA TCGCATGGAT CTCGGCTTCC GGCTGTATTG CCTCCCTGAT CGGCGCTTTT ATCGCCAACA TCGACCGCAA ACGCACCGAC ATGGCCGTAC TCCGTCTTCT CGGCTTTCGT CGTCGGGCGA TTACCCTATT TATCGTGATC CAGGCGCTTT GTCTCACGGG TGTGGCATTC AGTGTCGCGT TGGCGATCTA CCTATTGGGA AGCGAATTAT TTAATCGCCT ATTTGGCACA TCCCTTCCCA ATCACCGGTT CGTTTGCCAC CTCGAACCCA TTCATTTTGT TACTGCACTT TTGTGCGTAC TGGCGGTGGC ATTCAGCGTT GCCGCCATTG GTGCGCTACG GGCGCTGAAA ATCGAACCTG CGGAGAGTCT ACGTGAAATA TAA
|
Protein sequence | MSSSLPELQP KHTLLLRMAL RDLLHDRKVT LCIVFSLIAV IAPLLLLFGL KNGIVSQLRH DLLDDPRTRE VRMTGNGNYD LTWLEQLAQR PEVGFTIPLT RSLNTQADLV RDSQHFAANA EVIPTGAGDP LLQGIPPLQQ DTQVVLSASA ARRLDVQTGD SFHLRINRNL EGQNQRATLE LSVSGILDEA KFSRPAAFIS LPLLVALEDY RDGFQVSLLG VSEGEPSRPR MRFARARLYA STLDDVAPLA SWLEAQHIES VTQAAQIESV RAIDRVLGLI FAVIAWISAS GCIASLIGAF IANIDRKRTD MAVLRLLGFR RRAITLFIVI QALCLTGVAF SVALAIYLLG SELFNRLFGT SLPNHRFVCH LEPIHFVTAL LCVLAVAFSV AAIGALRALK IEPAESLREI
|
| |