Gene Pecwa_0456 details

Gene Information

• Locus tag: Pecwa_0456
• ID: 8528820
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 491177
• End bp: 491740
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 35%
• Product: Type II site-specific deoxyribonuclease
• Protein accession: YP_003257901
• Protein GI: 261819795

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.237745
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTTG AATTGCATTC TGATTGGCAA AAATTAATAG ACTTATGGCC GCAAGTTGAA 
GAGTACCAAC GTTTAGCCAA TAAACATGGA GTTTATGATA TATTCCAAGA TAATGGCGGA 
AAGCTTTTAC AGGTATTATT ACTTTTAAGC TTGAAAGTTC TTCCTGGACG TGAAGGAAAT 
GACGCTCAGG ATATCACTGG TACTGAATTT GAATTGAAAT CAGTCAATGT TGAATTGACT 
AAAAGTTTCT CTACGCACCA TCATATGAAT CCTTCAATAA TTTCTAAATA TAGAAAGGTT 
CCATGGATTT TTGCGATCTA TAGTAACATC ACAATAAGAT CTGTTTATTT GCTTATGCCT 
ATTGAACTTG AGTTTTTTTA TGAAAAATGG GAGGGTCAAT GGCATGAAAG AGGTGGTAGA 
GATATTAATA ACCCAAAAAT TCCAGTGAAG TATGTTATGG AACATGGCTG TTTGCTTTGG 
TCAAATACAT CACCGCAAGA ATTACTCTGG ACTCCAGAAA TAACAAAACA AGGTGACCTT 
GGCGGATTCG AAGCAGAAAA TTAA 

 

Protein sequence

MKFELHSDWQ KLIDLWPQVE EYQRLANKHG VYDIFQDNGG KLLQVLLLLS LKVLPGREGN 
DAQDITGTEF ELKSVNVELT KSFSTHHHMN PSIISKYRKV PWIFAIYSNI TIRSVYLLMP 
IELEFFYEKW EGQWHERGGR DINNPKIPVK YVMEHGCLLW SNTSPQELLW TPEITKQGDL 
GGFEAEN