Gene Pecwa_0433 details

Gene Information

• Locus tag: Pecwa_0433
• ID: 8528796
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 462948
• End bp: 469985
• Gene Length: 7038 bp
• Protein Length: 2345 aa
• Translation table: 11
• GC content: 54%
• Product: filamentous hemagglutinin family outer membrane protein
• Protein accession: YP_003257882
• Protein GI: 261819776

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.365206
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAGT ACCTGTATCG CATCGTTTTT AACCGCGCTC GCGGCGTGTT GATGGTGGTC 
TCTGAACTGT GTCGCGGCTG CGTCAAACAT TCCGCGCCGT TGGGCCTTGG GCCGACGCTG 
AGTCAGATAA CCGGGCGACT CTCTCCACTG ACGTTCCTAT TGCTGGGGGT GATGGGATTT 
GTCACGCTTG CGCCTGTGGC ACAGGCGAAC ATTGTCGCGG ACGGCAATGC GCCCGGTAAC 
CAAAAACCTA ACATCTTACA AACGGCAAAC GGGACGCCAC AGGTCAATAT TCAAACGCCA 
AGTGAAGGAG GCGTATCGCG CAATGTCTAC AGCCAGTTCG ATGTGAATCA GCAGGGTGCC 
ATTCTCAATA ACTCGCGTAA TCAGGTGCAA ACACAGCAAG GTGGTTGGGT TGCGGGTAAC 
CCGTGGCTGG CTAAAGGTGA AGCAAAGATC ATTCTGAATG AAGTGAATTC ACGCGATCCC 
AGCAAATTAA ACGGATATAT CGAAGTCGCA GGGAAAAAAG CACAGGTCGT CATCGCCAAC 
CCGTCTGGCA TCACCTGTGA CGGCTGCGGT TTCATCAATG CGAACCGGGC GACGTTGACG 
ACCGGCAAGG CGATGATGGA AAACGGTCAA CTTAAGGGCT ATCAGGTTGA GAGAGGCACT 
ATTCGCGTTC AAGGGGCGGG GATGGATTCC AGCCGTCAGG ATTATACCGA CCTGATCGCA 
CAGAGTGTAG AAATCAACGC CGGGCTATGG GCGAACGATC TGAAAGTGAC GGCAGGGCGC 
AATACCGTTG ATGCCGAGCA GCAGAAAATT GAGAAAGCAG CGACGGCCTC AGCGTCAACG 
GCTAGCACAG AGCCGAAGCT GGCGGTGGAC GTAGCACAAC TCGGCGGTAT GTACGCGGGT 
AAAATCCAGC TCATTGGTAC GGAGAAAGGC GTTGGGGTAC GCAACGCGGG GGCGATTGGC 
GCACAGGCAG GAAGCGTAAC GATCTCTGCC GATGGCCGCA TTGAGAACAG TGGCAGCATT 
AATGCCTCAC AGGATGTACA ACTGACAGGC CGTGAACTGG ATAATAGCGG TAAGGTTTAC 
GCCCAGCGTG ATGTCGGTGT CAGCACACGG CAACAGACCG CTAACCGTGG CGTACTGGCT 
GCGCAGCGCA ATGCGACAGT GAAAGCAGCA AATATCACCA ACCAGAAAGG CGCAGTGCTG 
GGGGCGGGAA TCAACAGTGA CGGCTCGGTG GCGCAAACGG GCAATCTATC TCTGACAGCT 
AGCCAGCGTG CTGATGCTAA CGGTCAGCAA CTTGCGGGCG GGTCGCTGAC AATGGCGGCG 
GCAGAGGTGA ATACCGATGG CGGTCAGACG CAGGCGACCG ATGTTACGCT CAATGCCACC 
AGTGGATCGG TTTCCAGCCG TAAAGCGAAA GTCAGCGCGG ATAACACCCT TAAGGTGACG 
GCGGCGAAAG CCGTCAATAA TACCGACGGT ACGCTCATTG CCGGGAAAAA GCTGGATGTA 
CAAGCCGATA GCCTGAGCGG CGACGGCCAA CTGTTGTCAC TGGGTGACAT GTCGCTGACT 
GCCGCACAGC GCTTCGATAA CCAGAGCGAT GTCATTGCAA ACGGTAAACT CGACCTCTCG 
GTGGCAGGGG ACGTCACCAA CCGCCAGAAA ATTCAGTCCG GCAGCGAACT GACGCTGACG 
GCAGCACGTC TCGATAATCA GGCCAATGGT GAAATCAGTA GTCAGAAGAC GCGGTTGGCA 
CTGTCGGATT CGTTAACCAA CCGTGGCCTG ATCGATGGGG GGCTAACCCG TATTGATGCG 
GGCATGCTAA ACAATATCGG TAGCGGTCGC ATTTATGGCG ACGGGATCAG CCTGCAAGCG 
CAGACGCTGA ATAATCTGAA TGAAGCTGGC ATGGGGGCGA CGATCGCCGC ACGCCAGCGT 
CTGGATCTGG GCGTTGGTAC GCTCAACAAT CGTCAACACG GCCTGATTTA TAGCGATGGC 
GTGATGGCGT TGGGACGTAA TCTGGATGCG GAAAGTAGAG CGACAGGCCA GGCTGATGCC 
ATCAATAACC ATAGCGCCAC GATTGAGTCC ATTGGTGATA TGACGTTGTC CGCTGGCCAG 
ATTAATAACG TTAACGATAA TTTGGTGACG GAAATCGTTA CCAGCGCGAC CCACATCGAT 
GAAGCCGTAC TGCGTGGACA TACCACACGC TACAACTGGA GCGATATTTG GCTGACAGAC 
AATAAATACG GTGTGAACAC TGCACATATG CCGGATGGCT ATGCCAGTGA GGACTTCTAT 
CGCTACATCT ATACCCGAAC GGTGAATGAA ACCCGGGTGA AAGAGAGCGA TCCGGGGCAG 
ATTCTGTCTG GTAATAATCT GTATCTGACA GCGGCACGGA TGACCAACAG TGATAGCCGT 
GTGATTGCGG CAGGTCTGTT GATTGACGGT GTGAAGGAGC TGAGCAATCT GGCGACGCCG 
GGCGAACGTA CTACGTCTGA GAGTGGGTGG CAGGAACGCT GGTATGCCAA AAAGAAAAAG 
AACTGGCGCG GGGTAACAAA AACCTCACAG GGGATTGACG GTAATAACTA TGCCCCAGCC 
GCGCAAGTCG AAACGATCGA TCTAAAAGTG CATGACTGGC GCGATCAGGC TGCATTTGAC 
GGTTCGGGTT ATGTAGTGAC GGCGCTGCGT GCCAACGGCG TTAATCAACA GGTTGGTTCG 
CCGACGATCA ATTTGCCAAA CAGCAGTCTA TTTACGCTGC AACCCGCCGC AGAAAGCCGC 
TATCTGGTGG AAACGGATGC GCGCTTCACC AACCAGAAAC AGTGGCTTAG CTCTGATTAT 
ATGCTTCAGG CCTTCAGTAT CGAGGGGCAG GATAAACGAC TAGGCGATGG CTTCTACGAA 
CAGCGAGAAG TACGCGAACA GATCGCCCAA CTAACCGGGC AGCGCTATCT GGCGGGTTAT 
AACAGCGACG AAGCACAGTA CAAGGCATTG ATGAATGCGG GTATCGCATT TGGTCGTCAG 
TTCTCATTGA CGCCGGGTGT AGCGCTGACG CCGGAGCAGA TGGCGTTGCT CACCACCGAC 
ATGGTCTGGA TGGTGAGAAA ATCGGTGACC TTGGCAGACG GATCTTCACA GACTGTACTT 
GCTCCACAGG TTTACACCAA CGTCCGCTCG AATGAACAAA TCGGTGCGGG TAGCCTGCTA 
GCAGGGAATA CGATCTCTGT TGGGCTAGCG GGTGGAATGC TGAACAGCGG ACGTATTGCC 
GCGCGCGATA CCCTGTTTAT CTCGTCTGAT GCGTTGGACA ATCAGGGAGG TTCTCTGCTG 
GGTAAACAGG TGCAGCTACA GGTTCGTACT GATCTGAATA ATGTCGGTGG CGTCATTCAG 
GCGGAAGATA AATTGACCGC ACTGGCGGGC GGCAATATCA CCAGTACCAG CACGTTGAGT 
GGCGGTGAGG ATAATCGCAT TCTGGATCGC ATAGCGGGTA TGTATGTTCA GAATGATAAG 
GGTGAACTGA CGCTGGCGGC CAGCAAAGAT ATCAACTTGA TCGGTAGCCA AGTGATTAAC 
TCGGGGGCCG ACAGTTCCAC GCTGATCAGC GCGGGGAATA ACCTGAACCT GGCGACGCTG 
ACGACCACGG AAACGCAGAA TAGCGACTGG GACAGCAATA ATTATCGCCA TTATCAGGCG 
AGCAAAGATA TCGGTAGCGA AATTGCCGCC AATGGTCAGA TAGCGTTACG CGCGGGACAA 
AATCTGAATG CGACGGCGGC ATCCGTCACC GCGCAGCAGG GGTTACAGGT TCAGGCGGGC 
AATGACATCA ATCTGACCAG TGGTGAGTCA TCCTATACGT TGACGGAGCA CAGCAAGCAA 
AGCAGTCGCG GTCTGCTCTC TGCGCAGTCC AGTGAACGCC ATGACAGCAT TCAGCACCAA 
TCGGCGGTGG GGAGTTCGTT CAGCGGCGGG ACAGTGGCGA TCGGTGCTGG CAATAACGTG 
CAGATCGTGG GTAGCTCCGT TGCGGGTACG CAGGATGTCA GCATTACCGC CGGGCGCGAT 
ATTACCGTGA CGACGGCGAA TGAAAATCAT CAGGAAACTC ATTTAAAGGA AGAGAAAAAA 
TCCGGTCTGA TGGGCAGTGG CGGTATCGGA TTTAGCATTG GGCAGGCCAG CCAAAAGAGC 
ACGACCGATA CCGATGGCAT GAGTGAGAAA GCCAGCATCA TAGGTAGTGA AAAAGGCAAC 
ACGACGCTGC TGGCGGGTAA TCAACTGACC GTGAAAGGTA GTGACGTGGT TGCCGGACAG 
GATCTGGCGC TGCAAGGTAA GACGCTAGCG GTGACGGCGG CGGAGAACAG TCAGACGCAG 
CGGCAGACCT ATGAACAGAA GCAGAGTGGG TTAACGCTGG CGCTGAGTGG CACGGTCGGC 
GGTATGGTGA ATACAGCGGT ACAAACGGCG CAGACGGCTA AGGAGACGGA GGATAGCCGT 
CTTCAAGCTT TGCAGGGTGT GAAAGCGACA CTAAGTGGCG TACAAGCGGG GCAGGCTGCC 
TATCTGGCTG CGCTGAAAGG TAAAGACGAT CCTACGAATA ACAATGTTGT GGGTGTCAGC 
GTCTCGCTGG GAAGCCAGTC ATCTAAATCC GAGCAAACCG TGGAGCAGCG CACCGCGCAA 
GGCAGCAGCC TGAACGCTGG GAGGAACCTG TCTCTGACCG CAACGGGTGA TGATATTCGG 
GTGCAGGGAA GCGAGCTGCG CGCGGGTCAG GATGTGGCGC TGGATGCGGC TCGTGATATC 
CAGCTAGTGT CCGCGCAGAA CAGTCAGCAC ACGGAAGGAA GCAACAAGAG TAAAGGTGGC 
AGCATTGGCC TGAGCCTTGG TGCTGGCAGC GGCGGCTTTA GCCTGAGCGT AAACGCCAGC 
ATGAACAAAG CGAAAGGCAA CGAACTGGGT GAAGGGCTGA GCCACACTGA AACGCTGCTG 
GATGCGGGGC GTCAGGTACG GCTAAACAGC GGTCGCGATA CCACATTGCA GGGTGCACAG 
GTCAGCGGGC AGCAGGTAAC GGCACGCGTC GGACGCGATC TGCTGTTGCG TAGCGAGCAG 
GACAGCGACG TGTATAACAG CAAGCAGCAG AGCATGAGTG CAGGCGTCAG CATTCCGATT 
TATGGTGCGG GAAGCGCGTC AGCCAGTTTC AACATGAGCA AGGACAAAAT GCACAGCGAT 
TATCGCAGCG TGCAGGAGCA GACCGGGCTG TTTGCCGGAC AAGGTGGCTA CGATGTACAG 
GTGGGCAACC ATACGCAGCT TGATGGTGCG GTGATTGGCT CCACGGCAGA GGCTGCGAAA 
AACCGATTAG ACACCGGGAC GCTAGGCTTT AGCGATATTG AAAACCGAGC AGAGTTTAAG 
ACCTCGCATA GTGGCGTCGG TATCAGTACT GGCGGGCCGG TAGGCATGCA GATGCTCAGT 
AACTTGGCAT CCAACTCGCT GATAAGTGGA AATAATGACG GTAATGCGGC GAGTACCACG 
CGTGCGGCGA TCAGCAATGG ACAGCTAGTC ATCCGTGATG AGGCCAACCA GCGTCAGGAT 
GTTGCACAAC TGAGTAACGA TGTCGAACAT GCAAACCAGA CGCTGAGCCC GATTTTTGAC 
AAAGAGAAAG AGCAGAAACG CCTGCAACAA ATGCAGGTGA TTGCAGAAAT CAGCAGTCAG 
GTGATGGATA TTGCCGGTAC GCACGGGGCA ATCATTGCGA CGAAAGCGGC GAAAGCGGAG 
GCCGATGCGA AGGCCGCAGG TCTCTCTGAT GCTGACAGGA AGATGGCGAG AGACGCGCTT 
GCGACAGGTA ATAAGCCGAA CCTGAACCCG ACAGAGGCCG AGATTCGGCA ATATGTTTAT 
CAGACGGCGT ATGACAAAGC TTATACTCAG GCCTTGAACA GTTCGGGTCT TGGCACGGGT 
GGTGCGATCC GTCAGGGTAT AATGGCGGTC TCGGCGGCGG TGCAGGGACT GGCGGGGGGT 
AACGTTGCAC AAGCGATAAC GGGTGCAGCG GCGCCGTATC TGGCGGCAGA AATCAAGAAA 
GCGACGACGG ATGCAAATGA TAACGTCAAT ATTGCAGCCA ATGCGGTAGC GCACGCGGTG 
CTGGGCGGGA TAGTGGCGGA AGCCAGCGGT AACAGTGCGC TGGCGGGTGC TGCGGGTGCG 
GCGACGGGTG AGCTAGCGGC GCGAGTCATT GCCGACAGGC TATACCCGGG TAAAGCCATC 
TCGGAGATGA CGGAAAGCGA AAAACAGACG GTCACCACGC TTTCGCTTCT GGCAGGTGGT 
CTGGCGGCCG GCACGGTGGG TGATTCGACG ACGAATGCGG TAGCGGGTGC GCAGGCAAGT 
CAGAATGCGG TGGAGAATAA CTATCTGTCC AGTGATATGT ATGCACTGAA CAGAAAAGTG 
AAAGCAGCTA AAGAAAAAGG AGAAGATATT GCGCCCATTC TTGAAGAGGC ACGCGAGCAG 
GCAGAAAAAG ACAGGGAAAA ACAGGCTGCA TCCTGTCATG ACCGCCCTGA TATGTGTGCA 
TTTGGCCGCG ATGTAGCAAA TGATGCTTAT AGTTCATATC TTGAAAACGG ATTCCTCCAG 
GGGATTGATT CAGATGTTGC CAGATTTGTA CAGCAGGAAA CGGCGAAAGA TAATGCAGTC 
ATAGACCGAT ATGCCAGTGA GTTTGGTAAA GGTCTGGCTG TTGCTTCTGA GGGGGCCGCT 
TTGCTAGCTG GAGCTGGAAT CAGTCTTATT CTTCCGGGAG GTAAAGGTGG CCCGGTAAAT 
ATAGCAACTG GTTTTAACAA GTCACCTCAG TCTATATGGG GACGTTCAAC TAACGAAATA 
GTCAAAGATT TTCAGTCTGC TGGTTATCAA GTTAATGTAC GACAATCTAC GAGAGGTTCT 
GGTCAGGCTG TTATTATTGA AGTGAAAGGG CATCCTGAAA TTAGCCAAAT TCAATATCAC 
CCCGGCGGGG GGCGTCATGG TGGAAGTTAC TATAAGATCT CAACCACAAC GCAGGGTACT 
GTAAAAGTTG TTGATCCTAG TACATATAAC CCTACTCAGG GAGAAAAAGC CACAATCATT 
GATAAGCCTA AAAAGTGA 

 

Protein sequence

MNKYLYRIVF NRARGVLMVV SELCRGCVKH SAPLGLGPTL SQITGRLSPL TFLLLGVMGF 
VTLAPVAQAN IVADGNAPGN QKPNILQTAN GTPQVNIQTP SEGGVSRNVY SQFDVNQQGA 
ILNNSRNQVQ TQQGGWVAGN PWLAKGEAKI ILNEVNSRDP SKLNGYIEVA GKKAQVVIAN 
PSGITCDGCG FINANRATLT TGKAMMENGQ LKGYQVERGT IRVQGAGMDS SRQDYTDLIA 
QSVEINAGLW ANDLKVTAGR NTVDAEQQKI EKAATASAST ASTEPKLAVD VAQLGGMYAG 
KIQLIGTEKG VGVRNAGAIG AQAGSVTISA DGRIENSGSI NASQDVQLTG RELDNSGKVY 
AQRDVGVSTR QQTANRGVLA AQRNATVKAA NITNQKGAVL GAGINSDGSV AQTGNLSLTA 
SQRADANGQQ LAGGSLTMAA AEVNTDGGQT QATDVTLNAT SGSVSSRKAK VSADNTLKVT 
AAKAVNNTDG TLIAGKKLDV QADSLSGDGQ LLSLGDMSLT AAQRFDNQSD VIANGKLDLS 
VAGDVTNRQK IQSGSELTLT AARLDNQANG EISSQKTRLA LSDSLTNRGL IDGGLTRIDA 
GMLNNIGSGR IYGDGISLQA QTLNNLNEAG MGATIAARQR LDLGVGTLNN RQHGLIYSDG 
VMALGRNLDA ESRATGQADA INNHSATIES IGDMTLSAGQ INNVNDNLVT EIVTSATHID 
EAVLRGHTTR YNWSDIWLTD NKYGVNTAHM PDGYASEDFY RYIYTRTVNE TRVKESDPGQ 
ILSGNNLYLT AARMTNSDSR VIAAGLLIDG VKELSNLATP GERTTSESGW QERWYAKKKK 
NWRGVTKTSQ GIDGNNYAPA AQVETIDLKV HDWRDQAAFD GSGYVVTALR ANGVNQQVGS 
PTINLPNSSL FTLQPAAESR YLVETDARFT NQKQWLSSDY MLQAFSIEGQ DKRLGDGFYE 
QREVREQIAQ LTGQRYLAGY NSDEAQYKAL MNAGIAFGRQ FSLTPGVALT PEQMALLTTD 
MVWMVRKSVT LADGSSQTVL APQVYTNVRS NEQIGAGSLL AGNTISVGLA GGMLNSGRIA 
ARDTLFISSD ALDNQGGSLL GKQVQLQVRT DLNNVGGVIQ AEDKLTALAG GNITSTSTLS 
GGEDNRILDR IAGMYVQNDK GELTLAASKD INLIGSQVIN SGADSSTLIS AGNNLNLATL 
TTTETQNSDW DSNNYRHYQA SKDIGSEIAA NGQIALRAGQ NLNATAASVT AQQGLQVQAG 
NDINLTSGES SYTLTEHSKQ SSRGLLSAQS SERHDSIQHQ SAVGSSFSGG TVAIGAGNNV 
QIVGSSVAGT QDVSITAGRD ITVTTANENH QETHLKEEKK SGLMGSGGIG FSIGQASQKS 
TTDTDGMSEK ASIIGSEKGN TTLLAGNQLT VKGSDVVAGQ DLALQGKTLA VTAAENSQTQ 
RQTYEQKQSG LTLALSGTVG GMVNTAVQTA QTAKETEDSR LQALQGVKAT LSGVQAGQAA 
YLAALKGKDD PTNNNVVGVS VSLGSQSSKS EQTVEQRTAQ GSSLNAGRNL SLTATGDDIR 
VQGSELRAGQ DVALDAARDI QLVSAQNSQH TEGSNKSKGG SIGLSLGAGS GGFSLSVNAS 
MNKAKGNELG EGLSHTETLL DAGRQVRLNS GRDTTLQGAQ VSGQQVTARV GRDLLLRSEQ 
DSDVYNSKQQ SMSAGVSIPI YGAGSASASF NMSKDKMHSD YRSVQEQTGL FAGQGGYDVQ 
VGNHTQLDGA VIGSTAEAAK NRLDTGTLGF SDIENRAEFK TSHSGVGIST GGPVGMQMLS 
NLASNSLISG NNDGNAASTT RAAISNGQLV IRDEANQRQD VAQLSNDVEH ANQTLSPIFD 
KEKEQKRLQQ MQVIAEISSQ VMDIAGTHGA IIATKAAKAE ADAKAAGLSD ADRKMARDAL 
ATGNKPNLNP TEAEIRQYVY QTAYDKAYTQ ALNSSGLGTG GAIRQGIMAV SAAVQGLAGG 
NVAQAITGAA APYLAAEIKK ATTDANDNVN IAANAVAHAV LGGIVAEASG NSALAGAAGA 
ATGELAARVI ADRLYPGKAI SEMTESEKQT VTTLSLLAGG LAAGTVGDST TNAVAGAQAS 
QNAVENNYLS SDMYALNRKV KAAKEKGEDI APILEEAREQ AEKDREKQAA SCHDRPDMCA 
FGRDVANDAY SSYLENGFLQ GIDSDVARFV QQETAKDNAV IDRYASEFGK GLAVASEGAA 
LLAGAGISLI LPGGKGGPVN IATGFNKSPQ SIWGRSTNEI VKDFQSAGYQ VNVRQSTRGS 
GQAVIIEVKG HPEISQIQYH PGGGRHGGSY YKISTTTQGT VKVVDPSTYN PTQGEKATII 
DKPKK