| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0432 |
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| Symbol | |
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| ID | 8528795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 461098 |
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| End bp | 462876 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | Polypeptide-transport-associated domain protein ShlB-type |
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| Protein accession | YP_003257881 |
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| Protein GI | 261819775 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.975087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAGGA ACGTTTTCAT TGGTTTTTTT TCATTAAAAA TCAATAAAAT AAAATCTATC
CCATTAACGC TCTCTGTATT GTTTCGTCCG TTAGTCTTCA CGCTGCCTTT ACCTTTCTTT
GCAGTCATGG TGAATGCCGC AACGCCAGTT GAGCTGCAAC AGCTCGATCA ACGTCAGATC
AACCAGCAGC AAATTAATCA GCAGGAACGG CAGCGTGCGC AAGAGCGACA GCTCTCACCT
CAGGCTCCAG ATGTCCGCCT GCAAGAGCCG GGGGCATTTC TGACACGGTT GCATTTTCCC
GTGGAGATGA CGCCCTGTTT TCCCATCAAC AAGGTGGAAT TACAGGGAAC GAAGGATTTC
CCCAGTTGGC TACCGTTGCA GCGGCTGGCC GATCAGGCAG TGAACCAATG TCTGGGCGGT
AAAGGCATTA ACTTGTTAAT GAGCGCGTTG CAGAATCGCC TGGTGAATCA CGGCTATGTA
ACTGCCCGCG TATTGGCGCC CGCTCAAGAT CTGAAAAGCG GTACGCTGAA GCTGGTGGTG
ATGGCTGGTA AGGTTGGCAA GATAACGCTG TCGCCGGACA GTGACCGCTA TATTCAGCTC
TATAGCGCTT TGCCTGCACG TGAAGGCGAA CTGCTTGATT TACGCGATAT CGAGCAGGGG
CTGGAGAATT TGCAGCGCGT ACCGACAGCA CGGGCTGATA TGCAACTGGT TCCAGGAGAG
AAACCGGGCG AGAGCGATAT CGTTGTTAGC TATAAACAAG CAAAACACTG GCGGCTTGGT
GCGACGCTGG ACGACTCCGG CACCAAAAGC ACAGGGCGCT ATCAGGGCGG TCTGACGTTT
TTCCTCGATA ATCCCTTTTC ACTGAGCGAC ACGTTCTATC TCTACGGTGG TCACGATCTA
CAAGGGCGTA CCAGCAAAGG TAGTAAGAGC TACGTTGCCC ATTACTCGGT GCCGTTTGGC
TACTGGCAGG CTGGAATGAC CGCCAGCGGT TATGACTATC ACCAGACGAT AGCCGGATTG
AATGAAAACT ATACCTATAA AGGTGAAAAC GAGAGCCTCA ATTTTCAACT GAGTCGAATG
TTACATCGTA GCGGTAGCCA GAAGACGTCG GTGAGTTATG AGGTCATGAC GCGTGAATCA
CGCAATTTTG TCAATGATAC CGAGGTTGAG GTACAGCGGA GTAAAACGGC GGGATGGCGT
CTGGGCTTAC AGCATCGTCA CTATATTTCC CAAGCCACGC TGGATGCTGC CGTTAGCTAT
CAGCGCGGTA CTCGCTGGTT TGGTGCGCAA CCCGTTCCAG AAGAAACCAA TAATGAAGGA
ACCGGGCTAT CAAAAATTAT TCAGTTCTCT TCCGAGTTGG ATGTTCCCTT CGCCGTGTTT
GATGAAACTT TCCGCTACAA CGTGCAATAC CGTCGTCAGC TCGCGAGTAC CCGCCTGACG
GCACAGGATC AATTCTCGAT TGGTAACCGC TGGACGGTTC GCGGCTTTGA CGGTGAGCTC
ACGCTCAGCG CCGACGACGG TTGGCTGGTA CGCAATGAGC TCGCCTGGCG CACGCCGCTT
CGGAATCAGG AACTGTATCT GGGTGTGGAT TACGGTGAGA TCAGTAACAA CAGTAAAGAG
CGGCTGATTG GTAACCATTT GGCAGGTGGT GTCATTGGAG TACGTGGCAA CGTATTAAAC
ACTGGCTATG ACCTGTTTGC GGGGATTCCG CTTTCCAAGC CTGATGGTTT TGAAACCAGC
CCGGCTGTCT TCGGTTTCAG CCTGAGCTGG CGGTACTGA
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| Protein sequence | MTRNVFIGFF SLKINKIKSI PLTLSVLFRP LVFTLPLPFF AVMVNAATPV ELQQLDQRQI
NQQQINQQER QRAQERQLSP QAPDVRLQEP GAFLTRLHFP VEMTPCFPIN KVELQGTKDF
PSWLPLQRLA DQAVNQCLGG KGINLLMSAL QNRLVNHGYV TARVLAPAQD LKSGTLKLVV
MAGKVGKITL SPDSDRYIQL YSALPAREGE LLDLRDIEQG LENLQRVPTA RADMQLVPGE
KPGESDIVVS YKQAKHWRLG ATLDDSGTKS TGRYQGGLTF FLDNPFSLSD TFYLYGGHDL
QGRTSKGSKS YVAHYSVPFG YWQAGMTASG YDYHQTIAGL NENYTYKGEN ESLNFQLSRM
LHRSGSQKTS VSYEVMTRES RNFVNDTEVE VQRSKTAGWR LGLQHRHYIS QATLDAAVSY
QRGTRWFGAQ PVPEETNNEG TGLSKIIQFS SELDVPFAVF DETFRYNVQY RRQLASTRLT
AQDQFSIGNR WTVRGFDGEL TLSADDGWLV RNELAWRTPL RNQELYLGVD YGEISNNSKE
RLIGNHLAGG VIGVRGNVLN TGYDLFAGIP LSKPDGFETS PAVFGFSLSW RY
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