Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0403 |
Symbol | |
ID | 8528766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 435277 |
End bp | 436194 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | CRISPR-associated protein Cas1 |
Protein accession | YP_003257853 |
Protein GI | 261819747 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0402524 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATGTTC CGCTCAACCC TATCCCTCTT AAGGATCGGG TTTCACTGAT CTTTCTGCAA TACGGGCAGA TTGATGTTAT CGACGGTGCG TTTGTGCTGG TGGATAAAAC CGGCGTGCGC ACGCATATTC CCGTTGGCTC GGTGGCCTGC ATCATGCTGG AACCGGGTAC GCGGGTTTCT CATGCTGCGG TGCGGCTGGC GGCAACGGTT GGCACATTGC TGGTGTGGGT CGGCGAAGCG GGCGTGCGGC TGTACGCGTC TGGTCAGCCC GGCGGCGCAC GCTCGGACAA ATTACTCTAT CAGGCTAAGC TGGCGCTGGA TGAGGAATTG CGTCTGAAGG TGGTGCGCAA AATGTTTGAA CTTCGCTTTG GCGAACCTGC ACCGAGCCGC CGTTCGGTCG ATCAGCTCCG AGGGATTGAG GGTGCCCGCG TGCGCCAAAC CTATACGCTG TTGGCACAGC AGTACGGCGT GAAATGGAAT GGCCGCCGCT ACGACCCGAA AGACTGGGAA CGTGGGGACA AAGTGAACCA GTGTATTAGC GCGGCGACAT CCTGCCTGTA CGGTATTACG GAAGCGGCCG TACTGGCGGC GGGTTACGCC CCTGCGATCG GGTTTGTCCA CAGTGGTAAA CCGCTCTCTT TTGTCTATGA CATTGCCGAC ATCATTAAAT TCGAGGGCGT GGTAGCGAAA GCCTTTGAAA TTGCTGCCCG TAACCCTGCC GAGCCGGATC GTGAAGTGCG GCTTGCCTGC CGTGATATTT TCCGCAGCCA GAAAACGCTG AGCAAACTGA TTCCCTTGAT TGAAGAGGTA TTGTCTGCGG GAGGGATTAC GCCACCGCTG CCACCGGACG ATGCTCAGCC GCCTGCGATC CCTGAACCGA AACCGTTTGG TGACAGCGGC CACCGAGGAC AGGGTTAA
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Protein sequence | MYVPLNPIPL KDRVSLIFLQ YGQIDVIDGA FVLVDKTGVR THIPVGSVAC IMLEPGTRVS HAAVRLAATV GTLLVWVGEA GVRLYASGQP GGARSDKLLY QAKLALDEEL RLKVVRKMFE LRFGEPAPSR RSVDQLRGIE GARVRQTYTL LAQQYGVKWN GRRYDPKDWE RGDKVNQCIS AATSCLYGIT EAAVLAAGYA PAIGFVHSGK PLSFVYDIAD IIKFEGVVAK AFEIAARNPA EPDREVRLAC RDIFRSQKTL SKLIPLIEEV LSAGGITPPL PPDDAQPPAI PEPKPFGDSG HRGQG
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