Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0397 |
Symbol | |
ID | 8528760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 427240 |
End bp | 429963 |
Gene Length | 2724 bp |
Protein Length | 907 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | CRISPR-associated helicase Cas3 |
Protein accession | YP_003257847 |
Protein GI | 261819741 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0215688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAGG AGGGCATCAT CGACCGGCGT TATTTCCACT ATTGGGGCAA AGCGAATAGA TCAACGGATG CGCTGGTGGG TGACGATTAT CACCTACTGC CTTATCACTG TTTGGATGTG GCGGCCTGTG GCTATTTCTT GTTAAAGGGA AATTATTTTC AGGCTAGCCA TGTACTGCGC GAACTGGCAT CTGGTGATGA TGATGTTGCT CCATGGTTTG CGTATTTTCT CGCCTGGCAC GATATCGGAA AATTTGCCCG TGGTTTCCAG CGTAAATATA TCAACCCGGA TTCCCCGTTG GTTCAGGCTT CAGGGCAGGT CGATACGGCG CGGCATGACG CGTTAGGCTT CTGGCTTTGG CAAGAGCGTG ATGATTTTCC CGATCTATTA CCTTTCTCTG CGGACATGCT CACCTCTGAC TCCCAAAAGA CGCTTGATAT CTGGCTGAAC ATCGTTACCG GGCACCACGG CAAGCCGCCA GAGGTGGTGA AAAAAGGGAG TCTGGCCTTT CATCGTGACG ATTATCGGGC AGTGCAAGAT TACCTGCATG ATGTAGCAAC ATGCTTTCCT GAAGTGTCCG TTTTTCCTAT GTGCTTTGCG GACAAGGGCT GGCGAAACAG GTTGAAGCAA CAAAGCTGGG GATTGGCTGG TTTGACCGTA CTGGCAGACT GGCTGGGTTC GCGTCAGCAG GACTTCTGGT ATTGCAGTAC GCCAATGCCG CTCGAAACCT ACTGGCGTGA GCATGCGCTA CCGATAGCGG AAAAGGTTGT CTCGCGTTTG CCGCGTACTC CGTCTCCCGC TTCTTTTCAT TCTATCCAAC GGCTCTTTCC CTTTATGCAG CAACCGACGC CGCTACAACA GAAAGCGCTA GAGGCTGATA TTTCCGCTGA CGGTCCGCAG CTTTTCATTC TGGAAGATGT GACCGGGGCC GGGAAAACGG AAGCGGCAAT GATACTGGCG CATCGACTGA TGGCGCAGCG AAAAGCGAGC GGCATTTATG TCGGTCTGCC GACGATGGCG ACGGCAAATG CCATGTATAA ACGGCTGGCG CAAGCCTATC GCGCATTATA TTCACCAGAA CATAACCCTT CGCTGATGCT GGCGCACGGT GCGCGACATA TGTCATCGGC CTTTATGCAA TCGCTATGGG AAGGTGACAG TCAGGGGCAG GCGCAGTACG ACAAGGAAGA AAATGCCGCC AGCAAAGACT GCAACATCTG GTTTGCGGAC TCGCGCAAGA AAGCGCTGCT GGCCGATATC GGCGTGGGTA CGCTCGACCA GGCACTGATG GCGGTGATGC CGTTCCGCCA CCAGTCGCTA CGGGTGCTAG GGCTACAGAA TAAACTGCTG ATTCTGGATG AAGTACATGC GTATGACGCC TACATGAGCA AGCTGATCGA GCTGTTGATT GGTTTCCATG CACAGCAGGG CGGCAGCGTG ATCATCTTAA CGGCGACGTT ACCGCTTACT CTGCGAGAAA AGCTGACGCG GGCATTTGCG CAGGGCATAG CCTGTGAGGC TGCCCCGCCC GATCCCAATG CCACGTATCC GTGGCTGACG CAGTTAACGC GCGAAGGATT GCGGGAAACG AAGTTGGAAA CGCGGAAAGA AGTGCAGCGC GAGGTCAAGA TTGGCTGGCT GACTGAGTGG TTGCAGGGCA TTGATTGCGT TAAGGCTGCG GTGGCGGCAG GGCAATCGAT CGCTTGGATT AGGAACACGG TGGATGATGC TATCGCGGTT TATCGCCAAC TCATTGAGGC GGGTGTCGCA GAGGACAATA TGCTGCTATT CCACAGCCGT TTTGCCTTTT GCGATCGGAT GGCGATTGAA GAGCGGGCGC TGGCGTGGTT TGGCAAAGAC AGTATGCCGG ATGAGCGTGC TGGTAAGGTG CTGATTGCCA CGCAGGTTGT CGAGCAGTCG CTGGATATTG ATGTCGATAA CATGATTAGC GACCTTGCGC CCATCGATCT GCTGATTCAA CGCGCAGGGC GGCTACAGCG ACATATTCGG TTTCTCGACG GGCGTCGTAA AACTGAGGCG GACGTTACAC CGCTAACGGA TGAGCGCCCG GCAGCGGTGC TGCATATCAT GGCGCCAGTC TGGCAGCCGG AAGCGGAGGC TGACTGGTTG GGCGATGAAC TGCGCAATAG TGGCTATGTT TACCCCGATC ATGCTGCGCT GTGGCGCACG CAGGCGATGT TGCGCGAGTG CGGTGCGATC AAAATGCCGG AAGCGGCGCG TCTGCTGATC AACAGCGTGT ATGAAGAACA GATCGCGGTG CCTTCGGCAT TGGAGGCAAT AGCCAACAAG GTACTGGGCG AGCGTTACGG CCAGCGTTCA GTGGCGAGTC AGTCGTCGTT AGCGCTTGTC CACGGTTATT GTGCCCAATC CAGCGAAGCA GGCTGGAGCG ATGCAGTGGA CATTTCCACC CGTCTGGGGG AGGAAACGCT GGATCTGTAT CTGGCATGGA AACCAGAAAA CGATGGTGAG CTACCTCAGC CTTATGCCAC ATCGGACACT TTTGCCTGGG AACAGAGCCG CGTGCAGGTA CGAGTTAGCT GGTGGCAGAA ACGTAAAACC GGATTACCGA TACTGGAAGG TGAGGCACTG GAACGGTTTC GGCAGCAATT ACACCGTCCA CAGGCAGAGG TGCTGCTGCT GAATAGAGGG GAAAACCACG CGTTTTATAG CGAACGGGTG GGGCTGATGT TACGACGTTC CTAA
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Protein sequence | MDKEGIIDRR YFHYWGKANR STDALVGDDY HLLPYHCLDV AACGYFLLKG NYFQASHVLR ELASGDDDVA PWFAYFLAWH DIGKFARGFQ RKYINPDSPL VQASGQVDTA RHDALGFWLW QERDDFPDLL PFSADMLTSD SQKTLDIWLN IVTGHHGKPP EVVKKGSLAF HRDDYRAVQD YLHDVATCFP EVSVFPMCFA DKGWRNRLKQ QSWGLAGLTV LADWLGSRQQ DFWYCSTPMP LETYWREHAL PIAEKVVSRL PRTPSPASFH SIQRLFPFMQ QPTPLQQKAL EADISADGPQ LFILEDVTGA GKTEAAMILA HRLMAQRKAS GIYVGLPTMA TANAMYKRLA QAYRALYSPE HNPSLMLAHG ARHMSSAFMQ SLWEGDSQGQ AQYDKEENAA SKDCNIWFAD SRKKALLADI GVGTLDQALM AVMPFRHQSL RVLGLQNKLL ILDEVHAYDA YMSKLIELLI GFHAQQGGSV IILTATLPLT LREKLTRAFA QGIACEAAPP DPNATYPWLT QLTREGLRET KLETRKEVQR EVKIGWLTEW LQGIDCVKAA VAAGQSIAWI RNTVDDAIAV YRQLIEAGVA EDNMLLFHSR FAFCDRMAIE ERALAWFGKD SMPDERAGKV LIATQVVEQS LDIDVDNMIS DLAPIDLLIQ RAGRLQRHIR FLDGRRKTEA DVTPLTDERP AAVLHIMAPV WQPEAEADWL GDELRNSGYV YPDHAALWRT QAMLRECGAI KMPEAARLLI NSVYEEQIAV PSALEAIANK VLGERYGQRS VASQSSLALV HGYCAQSSEA GWSDAVDIST RLGEETLDLY LAWKPENDGE LPQPYATSDT FAWEQSRVQV RVSWWQKRKT GLPILEGEAL ERFRQQLHRP QAEVLLLNRG ENHAFYSERV GLMLRRS
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