| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0394 |
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| Symbol | |
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| ID | 8528757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 423508 |
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| End bp | 425067 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | porin LamB type |
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| Protein accession | YP_003257844 |
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| Protein GI | 261819738 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.215814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAA GCCACCTTGC TGTGACGATA GGATTATTAC TCTCCTCCCC GCTTTATGTT
TCTGCTGCCA ACACCGATAG TATCGAAGAA CGTCTGAACG CAATGGAACA GCGTTTACAA
CAGGCTGAAG CCCGCGCTCA AGCCGCCGAG GCCAGAGCCA CTGCCGCCGA GAAACAAACC
CAGCAACTCG CCACCCGTAC CACACAAACC GAACAGAAAA CTCAGCAGGT GGAACAGCGC
ACGACGGCGC TGGCCAAGCA GAAATCGTTC GCCGATGGAT TTGAATTCCA CGGCTATGCG
CGTTCCGGTC TGTCAATCAA TGATTCCGCG ACCAGTTCCA AAACCGATAT CGGGCCGGGC
ATGTCCCCTG CCGGTCAGAC GGGTGGACAC ATTGGTCGCC TGGGGAATGA AGATGACACC
TACGTTGAGC TCAAACTAGA GCACAAACAA AAGCTGGATA ACGGCGCGAC CACGCGCTTC
AAGGTAATGA TGGCGGACGG CCAGCGCAGC TATAACGACT GGACAGCCGC CACCAGCGAC
CTGAACATCC GCGAAGCCTT CGTCGAGCTG GGATCGCTGC CGACCTTCAC TGGCGCGTTT
AAAGACACCA CGCTGTGGGC AGGTAAACGC TTCGATCGCG ATAACTTCGA TATTCACTGG
CTCGATAGCG ACGTGGTGTT CCTTGCTGGC ACGGGTGGCG GGATCTATGA CGTGAAATGG
GCAGATAGCG CCAAGAGTAA TTTCTCGCTG TATGGCCGCA GCCTCGGCGA AATTACCGCG
CTGGACAACG ACATCAAAAA CTACGTCTTT ACCGCCAACA ACTACGTCGG GCCATTCCAG
TTCATGCTGA GCGGCATGAA GGCGAAAAAC AACGATATCG ACTCAGCCAG AGCCAGTGAT
ATCGCAAGGG CAGGAACCAA CCGCGATTAT TCTACGTGGG TCAGTAACCC TAATGCGGGC
GATAAAGGCT ATCACGCAAT GGTGGCATAC CACGGCGACA GCTTCTACGG CTTACGCGAC
GGGACATCAA AAACCGCGAT CCTTTACGGC CACGGACTGG GCGGTGAAGT GAAGGTCATC
GGCTCCGACG GCAACCTGAC CAATGACGCC AACACCTGGC GGTTTGCGAC CTACGGCACA
ACAGCGCTGA ACAAGACCTG GAGCTTCGCG CCGTCCATTC TGGCGCAAAC CAGCAAAGAC
CGTTACGTCA ACGGCGACAG CTACGAATGG GTGACTTTTA ATGCGCGCCT GATTCAGGAA
ATCACCGAAA ATTTTGCACT GGCCTATGAA GGCAGCTATC AATACATGGA CCTCGATCCG
CGCGGTTATC GGAGCCTGAA TCAGGTTAGC GGCGGCTTCT ATAAACTGAC CTTCGCGCCT
ACGTTCAAAG TCGGTGATAT CGGCAACTTC TTCAGCCGCC CTGAGTTGCG CGTGTTTGCC
AGTTATATGG ACTGGGATAA ACGACTGGAT AATTACTCCA GTGAAGATAC GTTTGGCTCC
ACCGGCTTTA AAGCAGGCGG CGAATGGAAC TTTGGCATCC AGATGGAAAC CTGGTTCTGA
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| Protein sequence | MKPSHLAVTI GLLLSSPLYV SAANTDSIEE RLNAMEQRLQ QAEARAQAAE ARATAAEKQT
QQLATRTTQT EQKTQQVEQR TTALAKQKSF ADGFEFHGYA RSGLSINDSA TSSKTDIGPG
MSPAGQTGGH IGRLGNEDDT YVELKLEHKQ KLDNGATTRF KVMMADGQRS YNDWTAATSD
LNIREAFVEL GSLPTFTGAF KDTTLWAGKR FDRDNFDIHW LDSDVVFLAG TGGGIYDVKW
ADSAKSNFSL YGRSLGEITA LDNDIKNYVF TANNYVGPFQ FMLSGMKAKN NDIDSARASD
IARAGTNRDY STWVSNPNAG DKGYHAMVAY HGDSFYGLRD GTSKTAILYG HGLGGEVKVI
GSDGNLTNDA NTWRFATYGT TALNKTWSFA PSILAQTSKD RYVNGDSYEW VTFNARLIQE
ITENFALAYE GSYQYMDLDP RGYRSLNQVS GGFYKLTFAP TFKVGDIGNF FSRPELRVFA
SYMDWDKRLD NYSSEDTFGS TGFKAGGEWN FGIQMETWF
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