Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_0392 |
Symbol | |
ID | 8528755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 420658 |
End bp | 422067 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | sucrose-6-phosphate hydrolase |
Protein accession | YP_003257842 |
Protein GI | 261819736 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.147761 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGGAAA TCCACTTACT CAAGCGCATG GCGCACGCCC TGATGTCAGG CCAATCACGG AAACAAGACG ATCCTTATCG CCCGGACTGG CATCTGTCCC CGAGCGTTGG CCTGCTTAAC GATCCGAATG GGTTTATTCA TCACAACGGG TGTTACCATC TGTTTTATCA GTGGAATCCT TTAGCCTGTG CCCACGGAGC AAAATTCTGG GGGCACTGGA GCTCCGCCGA TCTGGTGAAC TGGAAGCATG AACCCGTGGC GCTGGTGCCG AGCGAAAGCT ATGAAAGCCA CGGCTGCTAC TCCGGTTCCG CCGTGGTAGA TCAGGAGGCG ATCATGTTGA TGTATACGGG TAACGTGAAA TACGATGATG GCTCACGTAC CGCGTTTCAG TGCCTCGCCC GCGAAAACCC CAACGGTGAA TATGACAAGC TGGGAGCAGT GCTAACGCTC CCCGACGGCT ACACTGGCCA CGTCCGCGAT CCGAAAGTGT GGCGTCATGA CGATCGGTGG TACATGGTGC TCGGTGCACA AGATCTCGAT CTTCAGGGAA AAGTACTGCT TTATCGTTCT GCCGATCTGC TGGCATGGGA CAAGATCGGC GAGATCGCCG GTTCCCGTTT AGGTGGACTC GGTGATTTTG GCTATATGTG GGAGTGTCCA GACCTGTTCC CGCTGGATGG CAAAGATGTA CTGATTTGCT GCCCACAGGG TATTCCCGCC GAAGAGGAAC GCTACCTGAA TACCTTTCAG GCTGGTTATT TTATTGGCTC ACTCGACTAC GAAAGCGGTA CTTATCCGCA TCAGGGGTTT CACGAACTGG ATCTCGGCTT CGAGTTTTAC GCACCGCAAA CTACGCTGAG TGAAGACGGG CGACGCCTGC TGTTCGGTTG GATGTCGATT CCTGATGACA ATGAGTTTTT TGAACCGACA ATCGAACATG GCTGGATCCA TACCATGACC TGCCCGCGTG AACTCACACG GCATGGCGAT CGCGTTTATC AACGTCCTGC CCGAGAATTG CAACAGTTAC GCAAACAGCA TGATATCTGG CAGGGTGCCG CAGACTACGC GCCGCAGTTC GCCATTAGCC GCGCGGAAAT ACTCATCACC GCTCAGGGAG AGTTCCAGTT CAACCTTGCC TCGCAGATCG TTCTCTGTTG GGACGGCGAA CGCGTCACGA TGAGCCGACA CAACCGCCGC ACTGGCGAAC CCGAACATCG CTATTGGCGC GGCGATCTGC GTCAATTGCA GATACTGTGC GATCGCTCCA GCATTGAGAT TTTTATCAAC GATGGCGAGG CCGTGATGTC TGCACGCTAC TTCCCGGAAA GCGAGGCGAC CATCATGTTC AGCGGCTCTG GACGATTAAC GCTACAACAC TGGCTGTTAG CGCCATGCGT GATAGAATAA
|
Protein sequence | MKEIHLLKRM AHALMSGQSR KQDDPYRPDW HLSPSVGLLN DPNGFIHHNG CYHLFYQWNP LACAHGAKFW GHWSSADLVN WKHEPVALVP SESYESHGCY SGSAVVDQEA IMLMYTGNVK YDDGSRTAFQ CLARENPNGE YDKLGAVLTL PDGYTGHVRD PKVWRHDDRW YMVLGAQDLD LQGKVLLYRS ADLLAWDKIG EIAGSRLGGL GDFGYMWECP DLFPLDGKDV LICCPQGIPA EEERYLNTFQ AGYFIGSLDY ESGTYPHQGF HELDLGFEFY APQTTLSEDG RRLLFGWMSI PDDNEFFEPT IEHGWIHTMT CPRELTRHGD RVYQRPAREL QQLRKQHDIW QGAADYAPQF AISRAEILIT AQGEFQFNLA SQIVLCWDGE RVTMSRHNRR TGEPEHRYWR GDLRQLQILC DRSSIEIFIN DGEAVMSARY FPESEATIMF SGSGRLTLQH WLLAPCVIE
|
| |