| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0344 |
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| Symbol | |
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| ID | 8528707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 382906 |
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| End bp | 383424 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | |
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| Product | type VI secretion system effector, Hcp1 family |
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| Protein accession | YP_003257804 |
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| Protein GI | 261819698 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAACTC CATGCTATAT CAGCATCGAA GGTAAAACAC AGGGCAACAT CACCGCAGGG
GCTTTCACCT CTGATTCTGT CGGCAACATC TACGTGGAAG GCCACGAAGA CGAGATGCTG
GTGCAGGAAT TCAAGCACAT CGTCACCGTA CCAACCGACC CGCAGTCCGG TCAGCCATCC
GGTCAGCGTG TCCACAAACC GTTCAAGTTC ACCGTCGCGC TGAACAAAGC GGTGCCGCTG
ATGTACAACG CCCTCGCCTC CGGCGAAATG CTGCCAACCG TCACCCTGAA GTGGTATCGC
ACCTCGGTAG AAGGCAAACA GGAGCACTTC TTCTCTACCG TGCTGACCGA TGCCACCATC
GTTGACGTTA ACTGCCAGAT GCCACACTGC CAGGACCCGG CCAAGCTGGA CTACACCCAA
CTGATTGAAG TCTCGCTGGC CTACCGCAAA ATCGACTGGG AGCACACCGT CGCGGGCACC
TCTGGCTCCG ACGACTGGCG CGCGCCGGTC GAAGCTTAA
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| Protein sequence | MPTPCYISIE GKTQGNITAG AFTSDSVGNI YVEGHEDEML VQEFKHIVTV PTDPQSGQPS
GQRVHKPFKF TVALNKAVPL MYNALASGEM LPTVTLKWYR TSVEGKQEHF FSTVLTDATI
VDVNCQMPHC QDPAKLDYTQ LIEVSLAYRK IDWEHTVAGT SGSDDWRAPV EA
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