Gene Pecwa_0320 details

Gene Information

• Locus tag: Pecwa_0320
• ID: 8528683
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 355586
• End bp: 356374
• Gene Length: 789 bp
• Protein Length: 262 aa
• Translation table: 11
• GC content: 54%
• Product: hypothetical protein
• Protein accession: YP_003257780
• Protein GI: 261819674

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00988497
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAACA CTTCCCGGAT GCCTGCACTG TTCCTCGGCC ACGGTAGCCC GATGAACGTG 
TTGGAAAATA ATGCGTATAC TCAGGCGTGG CAAACGTTGG GTGAGGCGCT ACCACGCCCG 
AAGGCGATTA TTGCGGTTTC CGCTCACTGG TATACCCGTG GTACGGCCGT GACGGCGATG 
GAAAACCCAC GCACCATTCA TGATTTTGGC GGCTTCCCGC AGGCGCTGTT TGATACACAG 
TACCCGGCAC CCGGTTCGCC TGAACTGGCA GCGAGGATCC AGCAGGTGTT GGCTCCGTAT 
CCCGTTACCG CCGATCAAAG CCAATGGGGA TTGGATCATG GTTCCTGGGG CGTGCTGATA 
AAGATGTATC CCGACGCGGA TATTCCCGTG GTGCAACTGA GCGTCGATGG CACGCAGCCT 
GCCGAGTATC ACTACGAATT AGGGCGCAAG CTGGCGGCAC TGCGTGATGA AGGCATTATG 
ATTGTTGCAA GTGGCAACGT GGTACATAAC CTACGGATGG TTAAATGGGA CGGCGATGCG 
GATGCGTATC CGTGGGCAAT ATCATTCAAT CAATTTGTTC ATGATAACCT GACCTATCAG 
GGTAACGACC ATCCGTTGGT TAATTTTATG CAGCATGATG GTGCCGCATT ATCCAACCCG 
ACGCCCGATC ACTATTTCCC TCTGCTTTAT GTACTGGGAA GTTGGGATGG CAAAGAAGAG 
ATCGGTATTC CGGTCGATGG GCTAGAAATG GGATCGCTGA GCATGCTGTC GGTGCTGGTG 
GGCGGCTAA 

 

Protein sequence

MNNTSRMPAL FLGHGSPMNV LENNAYTQAW QTLGEALPRP KAIIAVSAHW YTRGTAVTAM 
ENPRTIHDFG GFPQALFDTQ YPAPGSPELA ARIQQVLAPY PVTADQSQWG LDHGSWGVLI 
KMYPDADIPV VQLSVDGTQP AEYHYELGRK LAALRDEGIM IVASGNVVHN LRMVKWDGDA 
DAYPWAISFN QFVHDNLTYQ GNDHPLVNFM QHDGAALSNP TPDHYFPLLY VLGSWDGKEE 
IGIPVDGLEM GSLSMLSVLV GG