| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0314 |
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| Symbol | |
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| ID | 8528676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 349408 |
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| End bp | 351426 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | LppC family lipoprotein |
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| Protein accession | YP_003257774 |
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| Protein GI | 261819668 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.92899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCCCT TTCATTTAGT CCGTACCCAG GCAGGGCGTG TTATCCCTGT TTTGTTAGCG
GCACTGTTTC TCGCAGGCTG TCCAAGCCAT GCACCGCAGA GCCCGCCACC CGAGGTTCAG
GGCAAAGCTG ACGCATCATC CGATTATTAT CTGCAACAGA TGCAGCAAAG TAGCGATAAT
AACAAGGCTG ACTGGCAATT ACTTGCTATT CGTTCCCTGT TACAGGAAGG AAAAGCCCCT
CAGGCAAGCC AGCAGTTCAA CACCCTGCCA GAAAAACTGA GCGCGGCGCA AAAGCAAGAG
CAGCAGTTAC TCAGTGCGGA ACTGTCCGCC GCCCAAAACA ATATGGATGC GGCCAAGGCA
GCGCTGAGCC AGCTTGATGT GGGCGCACTT TCCGAGCAGC AGAAATCGCG TTACTACCAG
ACACAAATCA AAACGGCACA AGGGCGTCCT TCCATTGAGC TACTGCGAGC CTACATTGCT
CAAGAGCCGC TGCTGAAAGG CGACGAGCAC CAGATGAATC TCGATCAAAC CTGGCTGGCA
TTGACGCAAA TGTCACCGCA GGAGTCTGGG GCGCTGCTGA TTAACGCGGA TGAAAACGTA
CTCCAGGGCT GGGTGGATTT GCTGAATAAC TACCAGAACA ACCGCGAGTC TCCTGACCAG
TTGCAGAGCG CGATTCAGGA CTGGAAAACC CGTTATCCGC ATCATCCTGC CGCGAAAAAC
CTGCCTATGC AGTTAAATCA GGTCATCAAT TATCAGCCAT CGTCTGTAAG TAGCATCGCG
CTGCTGTTAC CGCTTAACGG CCAGGCGCAG GTTTTCGCTA ATGCTATCCA GCAAGGTTTT
AACGCAGCAA AGAATGGTCA GATAGCCACA GCGGCCGTCT CTGCGCCCGT CGCACCGCCA
ACGGATACCG CACAAGCCGG ACAGGTAACC CCATCATCAG ATGGTCAGAA CGCCCAATCG
CCCGCGCCAT ACAGCGATCA GGCGGTGGCC TCAACGACGC CAGCACCTGC AGCACAGGCT
ACAAGCGCAG GGCTGTCCAG CTCGCTTCCG GTAAAAGTGT ATGATACCTC TTCACAGCCG
CTGGCTAATA TTCTCACTCA GGCACAGCAA GATGGTGCAT CGCTGGTTAT CGGTCCACTG
CTGAAAAATG AAGTGGATCA GTTGGCGAGC AACCCGTCGC CACTGAATAT TTTGGCGTTG
AACCAGCCGG AACGTGTAGA AAATAGCCCT AACATCTGCT ATTTCGCGCT CTCGCCAGAA
GATGAAGCCA GAGACGCAGC TAAGTTTATC CATCAGCAGG GTAAACAGCA GCCTCTGGTC
TTAGCCCCTC GCGGCGCGCT GGGCGACCGT ATCGTCAACG CCTTCGCACA GGCCTGGAAC
CAGCAAAGCG GTACCAGCGC TCTGCAACAG CGCTTTGGCA ATTCGGCAGA GTTAAAACAG
GCCATCAATA GCGGCGCAGG TTTAAGCCTG AACGGCCAGC CTGTCAACGT ATCGCAGCAG
CAGGCACAGG CGGGTACTAC CATCGGTGGC CTGACCATCC CATCGCAGGT TCAACCAACG
GCCAGTTCGT CCGTCAGCGG TAATATCGAT GCGGTCTATA TCATCGCCAC GCCAGATGAG
TTGGCACTAA TTAAGCCGAT GATCGATATG CGTACCTCGT CACGTGCTCG TCCTGCGCTC
TACGCCAGCT CACGCAGCTT CCAGGCTGGA TTAGGCCCTG ATTTCCGCCT CGAAATGGAA
GGTTTACAGT TCAGTGATAT CCCGCTGTTA GCAGGCGCGA ACCCGGCCTT GATGCAGCAA
GTCAGCAGCC AGTTTAAAAA CGATTACTCG TTAGTCCGTC TGTATGCTAT GGGGATGGAT
GCCTGGACGC TCGCCAGCCA CTTTGGCGAG ATGCGCCAGA TTCCGGGCCA CCAGATTTCC
GGTGCAACGG GAATGTTAAG CGCAGGACCG GATTGCACCA TTAACCGGCA GCTCACCTGG
CAGCAATACC GTCAGGGCCA ATTGGTACCC GTGCTCTGA
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| Protein sequence | MLPFHLVRTQ AGRVIPVLLA ALFLAGCPSH APQSPPPEVQ GKADASSDYY LQQMQQSSDN
NKADWQLLAI RSLLQEGKAP QASQQFNTLP EKLSAAQKQE QQLLSAELSA AQNNMDAAKA
ALSQLDVGAL SEQQKSRYYQ TQIKTAQGRP SIELLRAYIA QEPLLKGDEH QMNLDQTWLA
LTQMSPQESG ALLINADENV LQGWVDLLNN YQNNRESPDQ LQSAIQDWKT RYPHHPAAKN
LPMQLNQVIN YQPSSVSSIA LLLPLNGQAQ VFANAIQQGF NAAKNGQIAT AAVSAPVAPP
TDTAQAGQVT PSSDGQNAQS PAPYSDQAVA STTPAPAAQA TSAGLSSSLP VKVYDTSSQP
LANILTQAQQ DGASLVIGPL LKNEVDQLAS NPSPLNILAL NQPERVENSP NICYFALSPE
DEARDAAKFI HQQGKQQPLV LAPRGALGDR IVNAFAQAWN QQSGTSALQQ RFGNSAELKQ
AINSGAGLSL NGQPVNVSQQ QAQAGTTIGG LTIPSQVQPT ASSSVSGNID AVYIIATPDE
LALIKPMIDM RTSSRARPAL YASSRSFQAG LGPDFRLEME GLQFSDIPLL AGANPALMQQ
VSSQFKNDYS LVRLYAMGMD AWTLASHFGE MRQIPGHQIS GATGMLSAGP DCTINRQLTW
QQYRQGQLVP VL
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