| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0288 |
|---|
| Symbol | |
|---|
| ID | 8528650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 321300 |
|---|
| End bp | 322112 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | putative ABC transporter ATP-binding protein YrbF |
|---|
| Protein accession | YP_003257748 |
|---|
| Protein GI | 261819642 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.154418 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCATG AGGCAACTAA TCTGGTCGAG ATCCGTGGTC TTAGCTTTCG GCGCGGAGAG
CGAGAGATTT TCACGGACAT CACACTTAAT GTCCCTAAAG GCAAAGTTAC TGCAATCATG
GGGCCTTCCG GTATCGGTAA AACCACGTTG CTGCGTTTGA TCGGCGGGCA ACTATCGCCG
GACAGCGGTG AAATCTGGTT TGATGGCGAG AATATCCCGG CGCTGTCGCG TAGCGAACTG
TACAACGCGC GCAAGAAAAT GAGCATGTTG TTTCAGTCTG GGGCGTTATT CACCGATTTG
AACGTGTTTG ATAATGTTGC CTGGCCGCTG CGTGAGCATA CCCAACTGCC GGAGTCCTTA
CTGCGTAGCA TCGTCATGAT GAAGCTGGAA GCGGTAGGGT TGCGTGGGGC TGCCGAACTG
ATGCCAGCGG AGCTTTCTGG CGGCATGGCG CGGCGTGCCG CACTGGCGCG AGCCATTGCG
CTCGACCCGC AGATGATTAT GTTTGATGAG CCTTTTGTCG GGCAGGATCC AATCACATTG
GGGACGCTGG TGAAGCTCAT CGATGAGTTA AACCATGCAT TGGGCGTGAC CTGCGTTGTC
GTTTCTCACG ATGTACCGGA GGTGATGAGC ATCGCCGATT ACGCCTATAT CGTGGCCGAC
AAACGGGTGA TAGCAGAAGG GACTGCGGAT CAACTGAGGG CGAACGATGA CCCGCAGGTC
CGTCAGTTCC TGGATGGCAT CGCCGACGGG CCAGTGCCTT TCCGTTTTCC TGCCGGTGAC
TATAAAACGT CGCTGCTAGG TTCAGGGGGT TAA
|
|---|
| Protein sequence | MNHEATNLVE IRGLSFRRGE REIFTDITLN VPKGKVTAIM GPSGIGKTTL LRLIGGQLSP
DSGEIWFDGE NIPALSRSEL YNARKKMSML FQSGALFTDL NVFDNVAWPL REHTQLPESL
LRSIVMMKLE AVGLRGAAEL MPAELSGGMA RRAALARAIA LDPQMIMFDE PFVGQDPITL
GTLVKLIDEL NHALGVTCVV VSHDVPEVMS IADYAYIVAD KRVIAEGTAD QLRANDDPQV
RQFLDGIADG PVPFRFPAGD YKTSLLGSGG
|
|---|
| |