Gene Pecwa_0283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_0283 
Symbol 
ID8528645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp317167 
End bp317739 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content52% 
IMG OID 
Productlipopolysaccharide transport periplasmic protein LptA 
Protein accessionYP_003257743 
Protein GI261819637 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.24235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCCA AAACCAATAA TCTGATGCGT AACACCCTGA TCGCCAGCTC GCTGTTCGCC 
GTCAGCGTTT CCGCCTTTGC CGTCACGGGC GATAGCAACC AACCGATTCG CATTGATTCA
GCACAGCAAT CTCTGGACAT GCAGGGCAAC ACCGTGACGT TCACGGGCAA TGTTGTCGTG
AAGCAAGGGA CGATTGAAGT GAAAGCCGAC AAGGTTGTCG TGACGCGCCC ACAGGGCACG
CAAGGCAGCG AAGTAGTGGA AGGTTACGGT AACCCTGTGA CGTTCTACCA GATGCAGGAC
AACGGCAAAC CAGTAAAAGG CCACGCGCAA AAAATCCGTT ACGAGCTGGC TACTGATTTT
CTGGTACTGA CAGGCAATGC CTATCTGGAA CAGCAGGACA GCAATGTAAA AGGCGATCGC
ATCACCTACC TGGTGAAACA GCAGCAGATG GAAGCGACCA GCGATAAAGG AAAACGCGTG
ACGACGGTGT TAGTCCCCTC TCAGCTTCAG GAGAAAGAGA AAAAGAGCCA GCCTTCTCGT
TCTCAACAAT CGCAACCACG GGTCACTGAA TAA
 
Protein sequence
MKSKTNNLMR NTLIASSLFA VSVSAFAVTG DSNQPIRIDS AQQSLDMQGN TVTFTGNVVV 
KQGTIEVKAD KVVVTRPQGT QGSEVVEGYG NPVTFYQMQD NGKPVKGHAQ KIRYELATDF
LVLTGNAYLE QQDSNVKGDR ITYLVKQQQM EATSDKGKRV TTVLVPSQLQ EKEKKSQPSR
SQQSQPRVTE